GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 00:25:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

001117KADA001042HT (KADA) A. deliciosa ripe fruit inner cortex Actinidia deliciosa cDNA clone KADAA00104, mRNA sequence.
FG440039.1:108-134
AATGCTTGCTGCTGCCCAATACATTGAGGG108AGATGGTAGCCCTGGAAGTATCCGACTTTTCAAACTTGGTCCTGCCGTAAGCAGCTA
001205KADA003191HT (KADA) A. deliciosa ripe fruit inner cortex Actinidia deliciosa cDNA clone KADAA00319, mRNA sequence.
FG443436.1:113-139
AATGCTTGCTGCTGCCCAATACATTGAGGG113AGATGGTAGCCCTGGAAGTATCCGACTTTTCAAACTTGGTCCTGCCGTAAGCAGCT
020304KAMA003936HT (KAMA) Actinidia hemsleyana roots with nematodes Actinidia hemsleyana cDNA clone KAMAA00393, mRNA sequence.
FG463101.1:151-177
AATGCTTGCTGCTGCCCAATACATTGAGGG151AGATGGTAGCCCTGGAAGTATCCGACTTTTCAAGCTTGGTCCTGCCGTGAGCGGCTA
020313KAMA005699HT (KAMA) Actinidia hemsleyana roots with nematodes Actinidia hemsleyana cDNA clone KAMAA00569, mRNA sequence.
FG465440.1:151-177
AATGCTTGCTGCTGCCCAATACATTGAGGG151AGATGGTAGCCCTGGAAGTATCCGACTTTTCAAGCTTGGTCCTGCCGTGAGCGGCTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGTCGGATACTTCCAGGGCTACCATCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTCGGATACTTCCAGGGCTACCATCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=AGTCGGATACTTCCAGGGCTACCATCT&k=0&no_gap=0&offset=0&limit=50
0.379 | 0.271 | search_minus_done; http://172.18.8.135:50400/match?q=AGATGGTAGCCCTGGAAGTATCCGACT&k=0&no_gap=0&offset=0&limit=50
0.382 | 0.003 | cgi_end;

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