GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 13:24:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 622 from patent US 9040774.
HK726327.1:1126-1153
CTAAAAGCTTTCAAACTTTATCATATTATC1126AGTGATTATGAGGAGTTTGACATATGACATATTAAATTATGCTAATGGCTTACCACTA
Sequence 622 from Patent EP2304030.
JA867057.1:1126-1153
CTAAAAGCTTTCAAACTTTATCATATTATC1126AGTGATTATGAGGAGTTTGACATATGACATATTAAATTATGCTAATGGCTTACCACTA
NF109F07ST1F1062 Developing stem Medicago truncatula cDNA clone NF109F07ST 5', mRNA sequence.
AW696680.2:566-593
CTAAAAGCTTTCAAACTTTATCATATTATC566AGTGATTATGAGGAGTTTGACATATGACATATTAAATTATGCTAATGGCTTACCACTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGTGATTATGAGGAGTTTGACATATGAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTGATTATGAGGAGTTTGACATATGAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.225 | 0.216 | search_plus_done; http://172.18.8.135:50400/match?q=AGTGATTATGAGGAGTTTGACATATGAC&k=0&no_gap=0&offset=0&limit=50
0.271 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=GTCATATGTCAAACTCCTCATAATCACT&k=0&no_gap=0&offset=0&limit=47
0.271 | 0.000 | cgi_end;

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