GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 08:16:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS14007B12 KS14 Capsicum annuum cDNA, mRNA sequence.
GD058064.1:277-296
GTCCCTAAATTTCCTAGATGAGACTGAAGA277AGTGCCGAGATTAGAGCCAATGTATTGAACCACTTGACCAGTATATATAT
KS25041K21 KS25 Capsicum annuum cDNA, mRNA sequence.
GD127522.1:106-125
ATATATATACTGGTCAAGTGGTTCAATACA106TTGGCTCTAATCTCGGCACTTCTTCAGTCTCATCTAGGAAATTTAGGGAC
TSA: Capsicum annuum MGMT_Contig4194, mRNA sequence.
JW054438.1:24-43
TACTGGTCAAGTGGTTCAATACA24TTGGCTCTAATCTCGGCACTTCTTCAGTCTCATCTAGGAAATTTAGGGAC
Fusarium falciforme strain Fu3.1 chromosome 2.
CP104051.1:3286498-3286517
CAAGGTGCTATCACCAGGCAGCGGAATACA3286498TTGGCTCTAATCTCGGCACTATCAGTCTAGACTCGAGTCAACTCACGGCA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:148601753-148601772
ATATATATACTGGTCAAGTGGTTCAATACA148601753TTGGCTCTAATCTCGGCACTTCTTCAGTCTCATCTAGGAAATTTAGGGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGTGCCGAGATTAGAGCCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTGCCGAGATTAGAGCCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.225 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=AGTGCCGAGATTAGAGCCAA&k=0&no_gap=0&offset=0&limit=50
0.373 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGCTCTAATCTCGGCACT&k=0&no_gap=0&offset=0&limit=49
0.376 | 0.003 | cgi_end;

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