GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:28:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

sf24d10.x1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-908 3', mRNA sequence.
AW309760.1:204-228
AATACTCTAAAAGATAAGTTATAGACTAGC204AGTGCCTCATACTCCTACTCTCATAACATGCATCAGCAGATGCGGATTTTTCACA
GM830002A10E11 Gm-r1083 Glycine max cDNA clone Gm-r1083-597 3', mRNA sequence.
BI967463.1:165-189
AATACTCTAAAAGATAAGTTATAGACTAGC165AGTGCCTCATACTCCTACTCTCATAACATGCATCGGCAGATGCGGATTTTTCACA
Glycine max cDNA clone: GMFL01-38-F04, 3'end.
BW674857.1:207-231
AATACTCTAAAAGATAAGTTATAGACTAGC207AGTGCCTCATACTCCTACTCTCATAACATGCATCAGCAGATGCGGATTTTTCACA
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:588721-588745
AATACTCTAAAAGATAAGTTATAGACTAGC588721AGTGCCTCATACTCCTACTCTCATAACATGCATCGGCAGATGCGGATTTTTCACA
454GmaGlobSeed254194 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK519562.1:59-83
TGTGAAAAATCCGCATCTGCCGATGCATGT59TATGAGAGTAGGAGTATGAGGCACTGCTAGTCTATAACTTATCTTTTAGAGTATT
CCCC15602.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC15602 5', mRNA sequence.
GR847330.1:129-153
TGTGAAAAATCCGCATCTGCCGATGCATGT129TATGAGAGTAGGAGTATGAGGCACTGCTAGTCTATAACTTATCTTTTAGAGTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGTGCCTCATACTCCTACTCTCATA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTGCCTCATACTCCTACTCTCATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.149 | 0.141 | search_plus_done; http://172.18.8.135:50400/match?q=AGTGCCTCATACTCCTACTCTCATA&k=0&no_gap=0&offset=0&limit=50
0.345 | 0.195 | search_minus_done; http://172.18.8.135:50400/match?q=TATGAGAGTAGGAGTATGAGGCACT&k=0&no_gap=0&offset=0&limit=46
0.346 | 0.001 | cgi_end;

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