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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-13 03:04:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Plecotus auritus genome assembly, chromosome: 3.
OY734024.1:124030884-124030903
TTATACAGAGCAATGTCTGCCAGGACCTTC124030884AGTGGAATATGCAGGCAGTGGTGACAGAGGGCAAGAACCACACCTGTCTG
TSA: Allium fistulosum mRNA, contig: AFU_05529.
FX559254.1:1362-1381
TTTTTTTGGGGTACTTACAGTGTCAATTTT1362AGTGGAATATGCAGGCAGTGGAGTGTAGATGAGTGATTGTTTGTTGATTG
TSA: Allium cepa CUDHLF2_14384 mRNA sequence.
JR857202.1:355-374
TCATTTTTTGGGTACTACAGTGTCAATTTT355AGTGGAATATGCAGGCAGTGGAGTGTAGATGAGTGATTATTTTGTTGATC
Allium cepa genome assembly, chromosome: 8.
LR994636.1:22956819-22956838
TCATTTTTTGGGTACTACAGTGTCAATTTT22956819AGTGGAATATGCAGGCAGTGGAGTGTAGATGAGTGATTATTTTGTTGATC
Pipistrellus pygmaeus genome assembly, chromosome: 3.
OX465304.1:92444263-92444282
CTAGGGACTCAGGTTCTTGCCCTCTCTCAC92444263CACTGCCTGCATATTCCACTGGAGGTCCTGGCAGACATTGCTCTGTATAA
Eptesicus nilssonii genome assembly, chromosome: 6.
OX621285.1:97483803-97483822
CAGACAGGTGTGGTTCTTGCCCTCTCTGAC97483803CACTGCCTGCATATTCCACTGAAGGTCCTGGCAGACATTGCTCTGTATAA
Odontocerum albicorne genome assembly, chromosome: Z.
OX463843.1:5177942-5177961
GCGAAAAAGTGTTAATCTAATGGTCGCAGG5177942CACTGCCTGCATATTCCACTCGACTTATATATTTTTATAATACAATATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTGGAATATGCAGGCAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTGGAATATGCAGGCAGTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.170 | 0.161 | search_plus_done; http://172.18.8.135:50400/match?q=AGTGGAATATGCAGGCAGTG&k=0&no_gap=0&offset=0&limit=50
0.263 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=CACTGCCTGCATATTCCACT&k=0&no_gap=0&offset=0&limit=46
0.265 | 0.002 | cgi_end;

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