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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:11:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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HWM005.E10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM005.E10, mRNA sequence.
BE421077.1:357-377
ACGCCGTCGACGTTTTGTGTGTGATTCAAG357AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
EBpi05_SQ001_M11_R pistil, 8 DPA, no treatment, cv Optic, EBpi05 Hordeum vulgare subsp. vulgare cDNA clone EBpi05_SQ001_M11 5', mRNA sequence.
BI776531.2:36-56
ACGCCGTCGACGTGGGGTGGGTGATTCAAG36AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
EBma04_SQ002_C11_R maternal, 10 DPA, no treatment, cv Optic, EBma04 Hordeum vulgare subsp. vulgare cDNA clone EBma04_SQ002_C11 5', mRNA sequence.
BM372849.2:502-522
ACGCCGTCGACGTTTTGTGTGTGATTCAAG502AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTT
Hordeum vulgare subsp. vulgare cDNA, clone: NIASHv1130J04, Normalized barley full-length cDNA library from seedling shoot at low temperature, 5' end sequence.
DK630967.1:507-527
ACGCCGTCGACGTTTTGTGTGTGATTCAAG507AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1130J04.
AK361009.1:507-527
ACGCCGTCGACGTTTTGTGTGTGATTCAAG507AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR722621.1:522350418-522350438
ACGCCGTCGACGTTTTGTGTGTGATTCAAG522350418AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR812266.1:529598646-529598666
ACGCCGTCGACGTTTTGTGTGTGATTCAAG529598646AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR812975.1:522350418-522350438
ACGCCGTCGACGTTTTGTGTGTGATTCAAG522350418AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR824637.1:513504931-513504951
ACGCCGTCGACGTTTTGTGTGTGATTCAAG513504931AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828092.1:520607118-520607138
ACGCCGTCGACGTTTTGTGTGTGATTCAAG520607118AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828120.1:501476479-501476499
ACGCCGTCGACGTTTTGTGTGTGATTCAAG501476479AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828137.1:545855267-545855287
ACGCCGTCGACGTTTTGTGTGTGATTCAAG545855267AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828158.1:490895449-490895469
ACGCCGTCGACGTTTTGTGTGTGATTCAAG490895449AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR865400.1:498166684-498166704
ACGCCGTCGACGTTTTGTGTGTGATTCAAG498166684AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR890101.1:512375762-512375782
ACGCCGTCGACGTTTTGTGTGTGATTCAAG512375762AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OU015686.1:515885059-515885079
ACGCCGTCGACGTTTTGTGTGTGATTCAAG515885059AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459907.1:508094235-508094255
ACGCCGTCGACGTTTTGTGTGTGATTCAAG508094235AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX459914.1:510017960-510017980
ACGCCGTCGACGTTTTGTGTGTGATTCAAG510017960AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX459921.1:501049244-501049264
ACGCCGTCGACGTTTTGTGTGTGATTCAAG501049244AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX459935.1:504017183-504017203
ACGCCGTCGACGTTTTGTGTGTGATTCAAG504017183AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX459975.1:529430322-529430342
ACGCCGTCGACGTTTTGTGTGTGATTCAAG529430322AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459982.1:503023188-503023208
ACGCCGTCGACGTTTTGTGTGTGATTCAAG503023188AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX460003.1:506108848-506108868
ACGCCGTCGACGTTTTGTGTGTGATTCAAG506108848AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460017.1:514515103-514515123
ACGCCGTCGACGTTTTGTGTGTGATTCAAG514515103AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460052.1:513170126-513170146
ACGCCGTCGACGTTTTGTGTGTGATTCAAG513170126AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460059.1:506507715-506507735
ACGCCGTCGACGTTTTGTGTGTGATTCAAG506507715AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460065.1:504084432-504084452
ACGCCGTCGACGTTTTGTGTGTGATTCAAG504084432AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460080.1:507109624-507109644
ACGCCGTCGACGTTTTGTGTGTGATTCAAG507109624AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460087.1:519100407-519100427
ACGCCGTCGACGTTTTGTGTGTGATTCAAG519100407AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460122.1:504756502-504756522
ACGCCGTCGACGTTTTGTGTGTGATTCAAG504756502AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460136.1:516571371-516571391
ACGCCGTCGACGTTTTGTGTGTGATTCAAG516571371AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460262.1:512847531-512847551
ACGCCGTCGACGTTTTGTGTGTGATTCAAG512847531AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460283.1:507519156-507519176
ACGCCGTCGACGTTTTGTGTGTGATTCAAG507519156AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare genome assembly, chromosome: 6H.
OX460297.1:517869517-517869537
ACGCCGTCGACGTTTTGTGTGTGATTCAAG517869517AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590746.1:522603185-522603205
ACGCCGTCGACGTTTTGTGTGTGATTCAAG522603185AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638747.1:509564526-509564546
ACGCCGTCGACGTTTTGTGTGTGATTCAAG509564526AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638782.1:526198570-526198590
ACGCCGTCGACGTTTTGTGTGTGATTCAAG526198570AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638817.1:506342104-506342124
ACGCCGTCGACGTTTTGTGTGTGATTCAAG506342104AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638880.1:531160712-531160732
ACGCCGTCGACGTTTTGTGTGTGATTCAAG531160712AGTGTACGTGTACATGCTATGGACTCGCTGTGTTTCTTGTTGCCAATAAAG
HA02K10u HA Hordeum vulgare subsp. vulgare cDNA clone HA02K10 3-PRIME, mRNA sequence.
BQ656662.1:41-61
CTTTATTGGCAACAAGAAACACAGCGAGTC41CATAGCATGTACACGTACACTCTTGAATCACACACAAAACGTCGACGGCGT
Hordeum vulgare subsp. vulgare mRNA, clone: baet37g11, 3' end, expressed in Shoot.
BY861811.1:41-61
CTTTATTGGCAACAAGAAACACAGCGAGTC41CATAGCATGTACACGTACACTCTTGAATCACACACAAAACGTCGACGGCGT
HM06M15w HM Hordeum vulgare subsp. vulgare cDNA clone HM06M15 3-PRIME, mRNA sequence.
CB880515.1:41-61
CTTTATTGGCAACAAGAAACACAGCGAGTC41CATAGCATGTACACGTACACTCTTGAATCACACACAAAACGTCGACGGCGT
Hordeum vulgare subsp. vulgare cDNA, clone: NIASHv1130J04, Normalized barley full-length cDNA library from seedling shoot at low temperature, 3' end sequence.
DK785576.1:340-360
CTTTATTGGCAACAAGAAACACAGCGAGTC340CATAGCATGTACACGTACACTCTTGAATCACACACAAAACGTCGACGGCGT
RUS17A11w HA Hordeum vulgare subsp. vulgare cDNA clone HA20F20, mRNA sequence.
FD520370.1:166-186
CTTTATTGGCAACAAGAAACACAGCGAGTC166CATAGCATGTACACGTACACTCTTGAATCACACACAAAACGTCGACGGCGT
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0298A07, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces.
AC250493.2:8752-8772
CTTTATTGGCAACAAGAAACACAGCGAGTC8752CATAGCATGTACACGTACACTCTTGAATCACACACAAAACGTCGACGGCGT
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0541P17, *** SEQUENCING IN PROGRESS ***, 61 unordered pieces.
AC259279.1:25909-25929
CTTTATTGGCAACAAGAAACACAGCGAGTC25909CATAGCATGTACACGTACACTCTTGAATCACACACAAAACGTCGACGGCGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTGTACGTGTACATGCTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTGTACGTGTACATGCTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.460 | 0.451 | search_plus_done; http://172.18.8.135:50400/match?q=AGTGTACGTGTACATGCTATG&k=0&no_gap=0&offset=0&limit=50
0.736 | 0.276 | search_minus_done; http://172.18.8.135:50400/match?q=CATAGCATGTACACGTACACT&k=0&no_gap=0&offset=0&limit=11
0.741 | 0.005 | cgi_end;

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