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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:10:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

AdH1184-CPY2-O5TR AdH1 Arachis duranensis genomic clone AdH1184-CPY2-O5, genomic survey sequence.
FI307553.1:591-610
CGGAAGATTTGTCCCGGGTATCCTGTGTGC591AGTGTTTGGCCGATTACGAGGTTCGGGTGTTCCTGTTGGGGTTTCTGTTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:73486887-73486906
CGGAAGATTTGTCCCGGGTATCCTGTGTGC73486887AGTGTTTGGCCGATTACGAGGTTCGGGTGTTCCTGTTGGGGTTTCTGTTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:93539455-93539474
TGGAAGATTTGTCCCGGGTCTCCTGTGTCT93539455AGTGTTTGGCCGATTACGAGGTTTGGGTGTTCCTGGAGTTGTTTGCATTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:98132591-98132610
TGGAAGATTTGTCCCGGGTCTCCTGTGTGC98132591AGTGTTTGGCCGATTACGAGGTTCGGGTGTTCCTGGATTTGTTTGCATTC
Chanos chanos genome assembly, chromosome: 7.
LR697112.1:35888791-35888810
AGCTGTTTTCTAAAGGTTATCCGGGCTGAC35888791CTCGTAATCGGCCAAACACTAATACATCTACTGCACTTGACTTTTCCGTC
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:32046584-32046603
GAATGCAAACAACTCCAGGAACACCCGAAC32046584CTCGTAATCGGCCAAACACTGCACACACGAGACCCGGGACAAATCTTCCA
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:134976084-134976103
GAATGCAAACAACTCCAGGAACACCCGAAC134976084CTCGTAATCGGCCAAACACTGCACACAGGCTACCCGGGACAAATCTTCCA
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:97047575-97047594
CCAAATCCTGAAGCTACGCGATGAGTCCCC97047575CTCGTAATCGGCCAAACACTAGCACACACAAAGGTTAGCCTTCGGCTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTGTTTGGCCGATTACGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTGTTTGGCCGATTACGAG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.183 | 0.175 | search_plus_done; http://172.18.8.135:50400/match?q=AGTGTTTGGCCGATTACGAG&k=0&no_gap=0&offset=0&limit=50
0.262 | 0.079 | search_minus_done; http://172.18.8.135:50400/match?q=CTCGTAATCGGCCAAACACT&k=0&no_gap=0&offset=0&limit=46
0.265 | 0.003 | cgi_end;

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