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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:00:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR722622.1:309354195-309354214
CGATGCCTTGCTGTTTCAGGATGTGCCACA309354195AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR812267.1:319787694-319787713
CGATGCCTTGCTGTTTCAGGATGTGCCACA319787694AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR812976.1:309354195-309354214
CGATGCCTTGCTGTTTCAGGATGTGCCACA309354195AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828100.1:302496366-302496385
CGATGCCTTGCTGTTTCAGGATGTGCCACA302496366AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828145.1:329862330-329862349
CGATGCCTTGCTGTTTCAGGATGTGCCACA329862330AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828152.2:307188451-307188470
CGATGCCTTGCTGTTTCAGGATGTGCCACA307188451AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828159.1:305572349-305572368
CGATGCCTTGCTGTTTCAGGATGTGCCACA305572349AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828166.1:319693537-319693556
CGATGCCTTGCTGTTTCAGGATGTGCCACA319693537AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828173.1:307560914-307560933
CGATGCCTTGCTGTTTCAGGATGTGCCACA307560914AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828194.1:313095569-313095588
CGATGCCTTGCTGTTTCAGGATGTGCCACA313095569AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828279.1:323416674-323416693
CGATGCCTTGCTGTTTCAGGATGTGCCACA323416674AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR865401.1:296963508-296963527
CGATGCCTTGCTGTTTCAGGATGTGCCACA296963508AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR890102.1:307210208-307210227
CGATGCCTTGCTGTTTCAGGATGTGCCACA307210208AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OU015707.1:308840648-308840667
CGATGCCTTGCTGTTTCAGGATGTGCCACA308840648AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OU701469.1:291567711-291567730
CGATGCCTTGCTGTTTCAGGATGTGCCACA291567711AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX459936.1:307099583-307099602
CGATGCCTTGCTGTTTCAGGATGTGCCACA307099583AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX459990.1:311212794-311212813
CGATGCCTTGCTGTTTCAGGATGTGCCACA311212794AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX459997.1:307191702-307191721
CGATGCCTTGCTGTTTCAGGATGTGCCACA307191702AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
OX460004.1:306958382-306958401
CGATGCCTTGCTGTTTCAGGATGTGCCACA306958382AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX460011.1:303816771-303816790
CGATGCCTTGCTGTTTCAGGATGTGCCACA303816771AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX460053.1:302583838-302583857
CGATGCCTTGCTGTTTCAGGATGTGCCACA302583838AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460060.1:307951931-307951950
CGATGCCTTGCTGTTTCAGGATGTGCCACA307951931AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460102.1:305614706-305614725
CGATGCCTTGCTGTTTCAGGATGTGCCACA305614706AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460109.1:310180221-310180240
CGATGCCTTGCTGTTTCAGGATGTGCCACA310180221AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460116.1:308339410-308339429
CGATGCCTTGCTGTTTCAGGATGTGCCACA308339410AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460123.1:307029459-307029478
CGATGCCTTGCTGTTTCAGGATGTGCCACA307029459AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460137.1:303161337-303161356
CGATGCCTTGCTGTTTCAGGATGTGCCACA303161337AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460151.1:305715867-305715886
CGATGCCTTGCTGTTTCAGGATGTGCCACA305715867AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460172.1:305814860-305814879
CGATGCCTTGCTGTTTCAGGATGTGCCACA305814860AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460200.1:308394782-308394801
CGATGCCTTGCTGTTTCAGGATGTGCCACA308394782AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460214.1:304912517-304912536
CGATGCCTTGCTGTTTCAGGATGTGCCACA304912517AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460221.1:308731331-308731350
CGATGCCTTGCTGTTTCAGGATGTGCCACA308731331AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460235.1:310342964-310342983
CGATGCCTTGCTGTTTCAGGATGTGCCACA310342964AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460263.1:310494192-310494211
CGATGCCTTGCTGTTTCAGGATGTGCCACA310494192AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460270.1:307922371-307922390
CGATGCCTTGCTGTTTCAGGATGTGCCACA307922371AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460277.1:309844244-309844263
CGATGCCTTGCTGTTTCAGGATGTGCCACA309844244AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460291.1:306793671-306793690
CGATGCCTTGCTGTTTCAGGATGTGCCACA306793671AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460298.1:307165702-307165721
CGATGCCTTGCTGTTTCAGGATGTGCCACA307165702AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460312.1:306590395-306590414
CGATGCCTTGCTGTTTCAGGATGTGCCACA306590395AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX590740.1:304906370-304906389
CGATGCCTTGCTGTTTCAGGATGTGCCACA304906370AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX590754.1:305416334-305416353
CGATGCCTTGCTGTTTCAGGATGTGCCACA305416334AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX590768.1:303801269-303801288
CGATGCCTTGCTGTTTCAGGATGTGCCACA303801269AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638748.1:306603857-306603876
CGATGCCTTGCTGTTTCAGGATGTGCCACA306603857AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX638755.1:309444226-309444245
CGATGCCTTGCTGTTTCAGGATGTGCCACA309444226AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638769.1:303434210-303434229
CGATGCCTTGCTGTTTCAGGATGTGCCACA303434210AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638776.1:302943218-302943237
CGATGCCTTGCTGTTTCAGGATGTGCCACA302943218AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX638790.1:315663791-315663810
CGATGCCTTGCTGTTTCAGGATGTGCCACA315663791AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638804.1:303918160-303918179
CGATGCCTTGCTGTTTCAGGATGTGCCACA303918160AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638818.1:312598053-312598072
CGATGCCTTGCTGTTTCAGGATGTGCCACA312598053AGTTGATCACCTCCACGGTCACCTGCTGTTGATATTGAGTCTTTCATGGA
Porphyra yezoensis cDNA clone:PS031h02_r, 5' end.
AV438143.1:156-175
TGTCACAGCCGACTACAGGCTGACGGGCCC156GACCGTGGAGGTGATCAACTGCAAGCAAGATGTGCCTGCCAACCGGTCTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX460095.1:294523583-294523602
TCCATGAAAGACTCAATATCAACAGCAGGT294523583GACCGTGGAGGTGATCAACTTGTGGCACATCCTGAAACAGCAAGGCATCG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638881.1:296590353-296590372
TCCATGAAAGACTCAATATCAACAGCAGGT296590353GACCGTGGAGGTGATCAACTTGTGGCACATCCTGAAACAGCAAGGCATCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGTTGATCACCTCCACGGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGTTGATCACCTCCACGGTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.199 | 0.190 | search_plus_done; http://172.18.8.135:50400/match?q=AGTTGATCACCTCCACGGTC&k=0&no_gap=0&offset=0&limit=50
0.345 | 0.146 | search_minus_done; http://172.18.8.135:50400/match?q=GACCGTGGAGGTGATCAACT&k=0&no_gap=0&offset=0&limit=1
0.347 | 0.002 | cgi_end;

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