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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:35:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sorghum bicolor cultivar Hongyingzi chromosome 3.
CP137827.1:77691592-77691611
ATTAACATAGTAGATTGTAACAATCCGACT77691592ATAAACCTCTCATTTGCCCGTAGCAGATTGTAAAAATTGCATATGACCAA
Sorghum bicolor cultivar Huandiaonuo chromosome 3.
CP137837.1:78085505-78085524
ATTAACATAGTAGATTGTAACAATCCGACT78085505ATAAACCTCTCATTTGCCCGTAGCAGATTGTAAAAATTGCATATGACCAA
Dianthus caryophyllus mRNA, clone: CES07M01, 5' end sequence.
FY385028.1:597-616
GAGGAGGAGGAGGATGAGAACCGTCGAAAG597CGGGCAAATGAGAGGTTTATTCAGGAGGATGAAGATGAGGAGGAGGAGGA
TSA: Dianthus caryophyllus mRNA, contig: CAK09.627.C1.
FX297815.1:596-615
GAGGAGGAGGAGGATGAGAACCGTCGAAAG596CGGGCAAATGAGAGGTTTATTCAGGAGGATGAAGATGAGGAGGAGGAGGA
TSA: Dianthus caryophyllus mRNA, contig: CAK09.627.C2.
FX297816.1:374-393
AGGAGGAGGAGGATGAGAACCGTACGAAAG374CGGGCAAATGAGAGGTTTATTCAGGAGGAATGAAGATGAGGAGGAGGAGG
Tortricodes alternella genome assembly, chromosome: 15.
OX401983.1:12632602-12632621
ATACATATTACGTTCTCAAATCAAAAACAC12632602CGGGCAAATGAGAGGTTTATGATAAGTATATAGTGGTCCAATAAGAAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATAAACCTCTCATTTGCCCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAAACCTCTCATTTGCCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.354 | 0.345 | search_plus_done; http://172.18.8.135:50400/match?q=ATAAACCTCTCATTTGCCCG&k=0&no_gap=0&offset=0&limit=50
0.526 | 0.172 | search_minus_done; http://172.18.8.135:50400/match?q=CGGGCAAATGAGAGGTTTAT&k=0&no_gap=0&offset=0&limit=48
0.529 | 0.003 | cgi_end;

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