GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 12:54:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

G1147P348RB4.T0 Anolis carolinensis pooled normalized regenerating tail cDNA library Anolis carolinensis cDNA, mRNA sequence.
FG768733.1:369-388
ACCTGAAAGTTAATCCAAAGACTGCTTATC369ATAAGAAATGGGCAGATCCCGGAAGCTCTGAACCCTTATTGGCTCTGGTA
Allium cepa genome assembly, chromosome: 1.
LR994629.1:155015907-155015926
GCTCTCATCATTTGGAAGAATAAAATAAAT155015907ATAAGAAATGGGCAGATCCCCCTGCTGTGAAAAGGTTGGACTGAAGAAAG
TSA: Allium fistulosum mRNA, contig: AFU_08020.
FX561745.1:1103-1122
CTTTCTTCAGTCCAACCTTTTCACAGCAGG1103GGGATCTGCCCATTTCTTATACTTATTTTCTCTATTTTATTCTTCCAAAT
Allium cepa genome assembly, chromosome: 1.
LR994629.1:155011387-155011406
CTTTCTTCAGTCCAACCTTTTCACAGCAGG155011387GGGATCTGCCCATTTCTTATATTTATTTTATTCTTCCAAATGATGAGAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATAAGAAATGGGCAGATCCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAAGAAATGGGCAGATCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.199 | 0.190 | search_plus_done; http://172.18.8.135:50400/match?q=ATAAGAAATGGGCAGATCCC&k=0&no_gap=0&offset=0&limit=50
0.227 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GGGATCTGCCCATTTCTTAT&k=0&no_gap=0&offset=0&limit=48
0.229 | 0.002 | cgi_end;

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