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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:40:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

NXNV_125_B07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_125_B07 5' similar to Arabidopsis thaliana sequence At1g60630 putative receptor kinase see http://mips.gsf.de/proj/thal/db/ind
AW870184.1:133-152
TGGTCTACCTGCACGCGGCTTCCTTGGCGC133ATAATTTCCACGGTAATCTCCACCCAGCAAATATTTTGCTAGGCAGAGAA
NXNV_105_H08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_105_H08 5' similar to Arabidopsis thaliana sequence At1g60630 putative receptor kinase see http://mips.gsf.de/proj/thal/db/ind
AW888018.1:133-152
TGGTCTACCTGCACGCGGCTTCCTTGGCGC133ATAATTTCCACGGTAATCTCCACCCAGCAAATATTTTGCTAGNCAGAGAA
NXLV_041_H10_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA clone NXLV_041_H10 5' similar to Arabidopsis thaliana sequence At1g60630 putative receptor kinase see http://mips.gsf.de/proj/thal/d
BM158960.1:365-384
TGGTCTACCTGCACGCGGCTTCCTTGGCGC365ATAATTTCCACGGTAATCTCCACCCAGCAAATATTTTGCTAGGCAGNGAA
NXSI_118_B09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_118_B09 5' similar to Arabidopsis thaliana sequence At1g60630 putative receptor kinase see http://mips.gsf.de/proj/thal/d
BQ701664.1:166-185
TGGTCTACCTGCACGCGGCTTCCTTGGCGC166ATAATTTCCACGGTAATCTCCACCCAACAAATATTTTGCTAAGCNNAGAA
NXNV_139_D06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_139_D06 5' similar to Arabidopsis thaliana sequence At1g60630 putative receptor kinase see http://mips.gsf.de/proj/thal/db/ind
CD021793.1:133-152
TGGTCTACCTGCACGCGGCTTCCTTGGCGC133ATAATTTCCACGGTAATCTCCACCCAGCAAATATTTTGCTAGGCAGAGAA
GQ00411.B3_I04 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ00411_I04 5', mRNA sequence.
DV972660.2:642-661
GGCTGGCCTACCTGCACCGGGCTTTCACGA642ATAATTTCCACGGTAATCTCCACCCATCAAATATCTTGTTGGGCAGAGAA
GQ02829.B7_L23 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02829_L23 5', mRNA sequence.
EX328993.1:68-87
GGCTGGCCTACCTGCACCGGGCTTTCACGC68ATAATTTCCACGGTAATCTCCACCCATCAAATATCTTGTTGGGCAGAGAA
GQ03011.B7_G12 GQ030 - Xylem planings - daytime and seasonal Picea glauca cDNA clone GQ03011_G12 5', mRNA sequence.
EX341231.1:339-358
GGCTGGCCTACCTGCACCGGGCTTTCACGC339ATAATTTCCACGGTAATCTCCACCCATCAAATATCTTGTTGGGCAGAGAA
li0676706 Radiata pine juvenile latewood cDNA library Pinus radiata cDNA clone 39448 H6, mRNA sequence.
FE520456.1:405-424
TGGTCTACCTGCACGCGGCTTCCTTGGCGC405ATAATTTCCACGGTAATCTCCACCCAGCATATATTTTGTTAGGCAGAGAA
Picea glauca clone GQ00411_I04 mRNA sequence.
BT100699.1:642-661
GGCTGGCCTACCTGCACCGGGCTTTCACGA642ATAATTTCCACGGTAATCTCCACCCATCAAATATCTTGTTGGGCAGAGAA
WS00734.B21_H02 WS-PS-N-A-8 Picea glauca cDNA clone WS00734_H02 3, mRNA sequence.
DR573288.1:751-770
TTCTCTGCCCAACAAGATATTTGATGGGTG751GAGATTACCGTGGAAATTATTAGTGAAAGCCCGGTGCAGGTAGGCCAGCC
GQ0048.TB_D03 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ0048_D03 3', mRNA sequence.
DV971323.2:752-771
TTCTCTGCCCAACAAGATATTTGATGGGTG752GAGATTACCGTGGAAATTATTCGTGAAAGCCCGGTGCAGGTAGGCCAGCC
GQ02829.SP6_L23 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02829_L23 3', mRNA sequence.
EX329343.1:751-770
TTCTCTGCCCAACAAGATATTTGATGGGTG751GAGATTACCGTGGAAATTATGCGTGAAAACCCGGTGCAGGTAGGCCAGCC
Pinus sylvestris EST, clone WZ0APSBB5YP01NM1.
HE634421.1:736-755
TTCTCTTCCTAACAAAATATTTGCTGGGTG736GAGATTACCGTGGAAATTATGCGCCAAGGAAGCCGCGTGCAGGTAGGCCA
Mimumesa dahlbomi genome assembly, chromosome: 6.
OU824118.1:11509074-11509093
CTCGATGCATCGATAGCTTTACAATTTCTC11509074GAGATTACCGTGGAAATTATTTTGGTAGATATACATGAAGCACAGGTGTT
Fragum whitleyi genome assembly, chromosome: 14.
OX411556.1:40465011-40465030
GATCTAACACACGCCAAAAACATTTTCTTT40465011GAGATTACCGTGGAAATTATACGCTAACTAAACAAAACAGACCGCGTTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATAATTTCCACGGTAATCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAATTTCCACGGTAATCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.506 | 0.497 | search_plus_done; http://172.18.8.135:50400/match?q=ATAATTTCCACGGTAATCTC&k=0&no_gap=0&offset=0&limit=50
0.853 | 0.347 | search_minus_done; http://172.18.8.135:50400/match?q=GAGATTACCGTGGAAATTAT&k=0&no_gap=0&offset=0&limit=40
0.858 | 0.004 | cgi_end;

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