GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 21:17:27, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:4761422-4761441
TCTTTTCCTCTCGCTTTAACACTCATACAA4761422ATACACTTTTCTTAGCGCGTAAATTGCATTAAGATTAAACCTTATTGAAC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:4234462-4234481
TCTTTTCCTCTCGCTTTAACACTCATACAA4234462ATACACTTTTCTTAGCGCGTAAATTGCATTAAGATTAAACCTTATTGAAC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:4658274-4658293
TCTTTTCCTCTCGCTTTAACACTCATACAA4658274ATACACTTTTCTTAGCGCGTAAATTGCATTAAGATTAAACCTTATTGAAC
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:4408451-4408470
TCTTTTCCTCTCGCTTTAACACTCATACAA4408451ATACACTTTTCTTAGCGCGTAAATTGCATTAAGATTAAACCTTATTGAAC
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:42046239-42046258
GTTCAATAAGGTTTAATCTTAATGCAATTT42046239ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:38766062-38766081
GTTCAATAAGGTTTAATCTTAATGCAATTT38766062ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCAAGAGGAAAAGA
Malus domestica cultivar Red Fuji chromosome 5.
CP147797.1:41480196-41480215
GTTCAATAAGGTTTAATCTTAATGCAATTT41480196ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Malus domestica cultivar Red Fuji chromosome 5.
CP147822.1:42459251-42459270
GTTCAATAAGGTTTAATCTTAATGCAATTT42459251ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Malus domestica cultivar WA 38 chromosome 5B.
CP165688.1:41437830-41437849
GTTCAATAAGGTTTAATCTTAATGCAATTT41437830ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Malus domestica cultivar WA 38 chromosome 5A.
CP165705.1:41371083-41371102
GTTCAATAAGGTTTAATCTTAATGCAATTT41371083ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAAGA
Malus domestica cultivar Golden Delicious chromosome 05.
CP168769.1:41101524-41101543
GTTCAATAAGGTTTAATCTTAATGCAATTT41101524ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAAGA
Malus domestica cultivar Golden Delicious chromosome 05.
CP168786.1:42261254-42261273
GTTCAATAAGGTTTAATCTTAATGCAATTT42261254ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:42374436-42374455
GTTCAATAAGGTTTAATCTTAATGCAATTT42374436ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAAGA
Malus domestica genome assembly, chromosome: 5.
OU696681.1:41788481-41788500
GTTCAATAAGGTTTAATCTTAATGCAATTT41788481ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Malus domestica genome assembly, chromosome: 5.
OU744546.1:41221583-41221602
GTTCAATAAGGTTTAATCTTAATGCAATTT41221583ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Malus domestica genome assembly, chromosome: 5.
OU744957.1:41763682-41763701
GTTCAATAAGGTTTAATCTTAATGCAATTT41763682ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAAGA
Malus domestica genome assembly, chromosome: 5.
OU744995.1:42663448-42663467
GTTCAATAAGGTTTAATCTTAATGCAATTT42663448ACGCGCTAAGAAAAGTGTATTTGTATGAGTGTTAAAGCGAGAGGAAAATA
Pollenia amentaria genome assembly, chromosome: 1.
OX031006.1:284725865-284725884
TTCGACGAGTTGTTGGTAAAATAAGGCCGC284725865ACGCGCTAAGAAAAGTGTATTAAAATATTAGGGCCATATTAATGCCACCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATACACTTTTCTTAGCGCGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATACACTTTTCTTAGCGCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.207 | 0.198 | search_plus_done; http://172.18.8.135:50800/match?q=ATACACTTTTCTTAGCGCGT&k=0&no_gap=0&offset=0&limit=50
0.359 | 0.151 | search_minus_done; http://172.18.8.135:50800/match?q=ACGCGCTAAGAAAAGTGTAT&k=0&no_gap=0&offset=0&limit=46
0.368 | 0.009 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).