GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 12:59:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:41781534-41781553
AAGAGACAAAAGGTGCCAGATTTTAGCAAA41781534ATACCTTTGTTGCCGCATTCTCAAATTTGCAAATGAAGTTTCTCGAAACA
Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:41745219-41745238
AAGAGACAAAAGGTGCCAGATTTTAGCAAA41745219ATACCTTTGTTGCCGCATTCTCAAATTTGCAAATGAAGTTTCTCGAAACA
TSA: Musa acuminata AAA Group Unigene9044_B1 mRNA sequence.
JV377284.1:815-834
TGTTTCGAGAAACTTCATTTGCAAATTTGA815GAATGCGGCAACAAAGGTATTTTGCTAAAATCTGGCACCTTTTGTCTCTT
TSA: Musa acuminata AAA Group Unigene82971_NK1 mRNA sequence.
JV443148.1:145-164
TGTTTCGAGAAACTTCATTTGCAAATTTGA145GAATGCGGCAACAAAGGTATTTTGCTAAAATCTGGCACCTTTTGTCTCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATACCTTTGTTGCCGCATTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATACCTTTGTTGCCGCATTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=ATACCTTTGTTGCCGCATTC&k=0&no_gap=0&offset=0&limit=50
0.171 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=GAATGCGGCAACAAAGGTAT&k=0&no_gap=0&offset=0&limit=48
0.173 | 0.001 | cgi_end;

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