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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:07:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pinus pinaster xylem EST, clone PP020E04.
BX249143.1:27-46
CGGCAAGCTGTATGCGAACGATCGGG27ATAGGTATCTTGCTCCTCAGAGGGATTTCAGAAGCGGTATTTACAGCGCC
Pinus pinaster xylem EST, clone PP031B04.
BX249992.1:276-295
CAGGCGGCAAGCTGTATGCGAACGATCGGG276ATAGGTATCTTGCTCCTCAGAGGGATTTCAGAAGCGGTATTTACAGCGCC
EST859801 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIEJ81 5' end, mRNA sequence.
CV148592.1:367-386
CGGGCGGCAAGCTGTATGCGAACGATCGGG367ATAGGTATCTTGCTCCTCAGAGGGATTTCAGAAGCGGTATTTACAGCGCC
EST960996 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIJM30 5' end, mRNA sequence.
DN465197.1:484-503
CGGGCGGCAAGCTGTATGCGAACGATCGGG484ATAGGTATCTTGCTCCTCAGAGGGATTTCAGAAGCGGTATTTACAGCGCC
EST1159516 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAN41 5' end, mRNA sequence.
DT625241.1:366-385
CGGGCGGCAAGCTGTATGCGAACGATCGGG366ATAGGTATCTTGCTCCTCAGAGGGATTTCAGAAGCGGTATTTACAGCGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATAGGTATCTTGCTCCTCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAGGTATCTTGCTCCTCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.314 | 0.305 | search_plus_done; http://172.18.8.135:50400/match?q=ATAGGTATCTTGCTCCTCAG&k=0&no_gap=0&offset=0&limit=50
0.415 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=CTGAGGAGCAAGATACCTAT&k=0&no_gap=0&offset=0&limit=45
0.415 | 0.000 | cgi_end;

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