GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 05:03:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjT16J16, TM1635.
AP010235.1:73668-73687
ATAGAGTGCGCAACATTTTTGTATGTGATC73668ATAGGTTATGCGCAACTAGGTAATTAATTAATATGGTCAACAAGCCAGCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:99422288-99422307
ATAGAGTGCGCAACATTTTTGTATGTGATC99422288ATAGGTTATGCGCAACTAGGTAATTAATTAATATGGTCAACAAGCCAGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATAGGTTATGCGCAACTAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAGGTTATGCGCAACTAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=ATAGGTTATGCGCAACTAGG&k=0&no_gap=0&offset=0&limit=50
0.122 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=CCTAGTTGCGCATAACCTAT&k=0&no_gap=0&offset=0&limit=48
0.122 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).