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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:12:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Mus musculus 6 BAC RP23-82N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence.
AC158670.5:74399-74418
TACATCAAGAGAAATTCTTTTAAGAGAGGA74399ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971564.1:5693118-5693137
TACATCAAGAGAAATTCTTTTAAGAGAGGA5693118ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971579.1:5500654-5500673
TACATCAAGAGAAATTCTTTTAAGAGAGGA5500654ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971599.1:5516656-5516675
TACATCAAGAGAAATTCTTTTAAGAGAGGA5516656ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus domesticus genome assembly, chromosome: 6.
OW971627.1:5734868-5734887
TACATCAAGAGAAATTCTTTTAAGAGAGGA5734868ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971641.1:5735291-5735310
TACATCAAGAGAAATTCTTTTAAGAGAGGA5735291ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus molossinus genome assembly, chromosome: 6.
OW971663.1:5643541-5643560
TACATCAAGAGAAATTCTTTTAAGAGAGGA5643541ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971714.1:5716526-5716545
TACATCAAGAGAAATTCTTTTAAGAGAGGA5716526ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971724.1:5709967-5709986
TACATCAAGAGAAATTCTTTTAAGAGAGGA5709967ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971747.1:5608356-5608375
TACATCAAGAGAAATTCTTTTAAGAGAGGA5608356ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus musculus genome assembly, chromosome: 6.
OW971766.1:5414645-5414664
TACATCAAGAGAAATTCTTTTAAGAGAGGA5414645ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971789.1:5428170-5428189
TACATCAAGAGAAATTCTTTTAAGAGAGGA5428170ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971810.1:5700442-5700461
TACATCAAGAGAAATTCTTTTAAGAGAGGA5700442ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus castaneus genome assembly, chromosome: 6.
OW971840.1:5534965-5534984
TACATCAAGAGAAATTCTTTTAAGAGAGGA5534965ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OW971858.1:5563987-5564006
TACATCAAGAGAAATTCTTTTAAGAGAGGA5563987ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OX389800.1:8531403-8531422
TACATCAAGAGAAATTCTTTTAAGAGAGGA8531403ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OX390150.1:6699984-6700003
TACATCAAGAGAAATTCTTTTAAGAGAGGA6699984ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Mus musculus genome assembly, chromosome: 6.
OX439020.1:10581817-10581836
TACATCAAGAGAAATTCTTTTAAGAGAGGA10581817ATAGTGAAGGGTGGAGGCAGGAGGGGCACCCCAAGCTCAAGAACAAACTG
Lotus japonicus genomic DNA, chromosome 1, clone: LjB20D08, BM1737.
AP009633.1:63179-63198
GTGGTGGAGACAACAATGGTGATGATGACA63179ATAGTGAAGGGTGGAGGCAGCAGTGGTGGAGGACGAGACAAAGTTAGAAC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:25701532-25701551
GTGGTGGAGACAACAATGGTGATGATGACA25701532ATAGTGAAGGGTGGAGGCAGCAGTGGTGGAGGACGAGACAAAGTTAGAAC
Berberis vulgaris genome assembly, chromosome: 14.
OY747137.1:28521584-28521603
TGAGAATATTATCCCCCTGGGGCATCGCCT28521584ATAGTGAAGGGTGGAGGCAGAGCAAGCATCAGAATGCCAAAATACTTCCC
Microcaecilia unicolor genome assembly, chromosome: 2.
LR594633.1:165808180-165808199
CATGTATGTCATGTTCAACAGCAATATTTT165808180CTGCCTCCACCCTTCACTATCTGGTAAATTTTCTCCCATATGAAGCAGGC
Mus musculus strain C57BL6/J chromosome 6 clone RP23-3L16, WORKING DRAFT SEQUENCE, 24 unordered pieces.
AC084164.1:173421-173440
CAGTTTGTTCTTGAGCTTGGGGTGCCCCTC173421CTGCCTCCACCCTTCACTATTCCTCTCTTAAAAGAATTTCTCTTGATGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATAGTGAAGGGTGGAGGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATAGTGAAGGGTGGAGGCAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=ATAGTGAAGGGTGGAGGCAG&k=0&no_gap=0&offset=0&limit=50
0.148 | 0.038 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCCTCCACCCTTCACTAT&k=0&no_gap=0&offset=0&limit=29
0.150 | 0.001 | cgi_end;

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