GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:02:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Rhinatrema bivittatum genome assembly, chromosome: 19.
LR584405.1:30878559-30878578
TATTTTCATGGGATTATTTAGGGTCAAAAT30878559ATATCAAGGACTGCAATAAAATGTGTGCAAGAGAAGTTTGGCAGTGTGAG
Pungitius pungitius genome assembly, chromosome: 12.
OX438552.1:8116423-8116442
CAGTTTTGTAGTCAAATATTTTAAACAAGC8116423ATATCAAGGACTGCAATAAATCATTAAAACGTATCGTCACCTGTTCCATT
Agrypnus murinus genome assembly, chromosome: 2.
OV816025.1:15077493-15077512
TGTTATTTTTCAATTGTTTTTCAAAAATGT15077493ATATCAAGGACTGCAATAAAAAACAATTCAGTTACCATTTTGTAGCAGAC
Pocota personata genome assembly, chromosome: 4.
OY720432.1:11681137-11681156
TGATTGATATTGCCATTTTGACGCAAGTAG11681137ATATCAAGGACTGCAATAAATAGCAAAGGACTGAGGACGCTTCCCTGCTG
Pungitius pungitius genome assembly, chromosome: 12.
OX438552.1:8639971-8639990
AATGGAACAGATGACGATACGTTTTAATGA8639971TTTATTGCAGTCCTTGATATGCTTTTTCGAAATATTTGACTACAAAACTG
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:184310035-184310054
CCTTGGGGCTTTTTCTATACGTAACCCCCT184310035TTTATTGCAGTCCTTGATATAAAACGCAGCAGCCTACACGATATGTAGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATATCAAGGACTGCAATAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATATCAAGGACTGCAATAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.113 | 0.105 | search_plus_done; http://172.18.8.135:50400/match?q=ATATCAAGGACTGCAATAAA&k=0&no_gap=0&offset=0&limit=50
0.146 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=TTTATTGCAGTCCTTGATAT&k=0&no_gap=0&offset=0&limit=46
0.147 | 0.001 | cgi_end;

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