GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 21:55:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Bombyx mori Nichi01 DNA, chromosome 9, complete sequence.
AP026190.1:1372407-1372426
CGCGACTTATACTCTAGAGTCTAGACAATT1372407ATCAAACAATGCACCCATGAAACACATACAGGATGTAGGAAAACGCATCC
Bombyx mandarina Sakado DNA, chromosome 09, sequence.
AP028291.1:1377800-1377819
CGCGACTTATACTCTAGAGTCTAGACAATT1377800ATCAAACAATGCACCCATGAAACACATACAGGATGTAGGAAAACGCATCC
ICPM1G04 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1G04 5', genomic survey sequence.
FI131393.1:240-259
GATTATGCTTGGCGTCGGCTTAGTTTGGTT240TCATGGGTGCATTGTTTGATTCGAGTATTTATTAGGGTTTTTGCATTCAT
Phragmites australis genome assembly, chromosome: 17.
OY282628.1:12618492-12618511
ATTGTTTAAGTGCATGATCAGGCTTTTGTG12618492TCATGGGTGCATTGTTTGATCCCTGCGTGGATCCCCTCTTCTGATCGTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCAAACAATGCACCCATGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCAAACAATGCACCCATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=ATCAAACAATGCACCCATGA&k=0&no_gap=0&offset=0&limit=50
0.143 | 0.045 | search_minus_done; http://172.18.8.135:50400/match?q=TCATGGGTGCATTGTTTGAT&k=0&no_gap=0&offset=0&limit=48
0.145 | 0.002 | cgi_end;

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