GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-04 18:32:21, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Zea mays genome assembly, chromosome: 1.
OZ261469.1:230842375-230842394
CGGCTCCTCATAGAGCCAAACCCAAGGTCC230842375ATCAAATCACATGAAGGCCCTAGGGTTCGTTGCTATTTGTCCTTGGAAGG
Notocelia cynosbatella genome assembly, chromosome: 5.
OZ281107.1:6870292-6870311
GCAGTTTACACTTGTTACTAACTCGTAACC6870292ATCAAATCACATGAAGGCCCGTTTGAGTAAAATTTATAATCAATAAGCAC
Plecotus auritus genome assembly, chromosome: 4.
OY734025.1:4765646-4765665
TTGATCCAGTCCAAGCTAAGAATCTTGTTA4765646GGGCCTTCATGTGATTTGATGTGTGACAACAGGATCCAGGGGCAAACACG
Vigna angularis mRNA, clone: VES07B11.
HX944756.1:395-414
GTCATATATACCTATTTATATATATCTATA395GGGCCTTCATGTGATTTGATATATGGTTAATTTGGTGACCCTTAAAATGG
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:7702274-7702293
GTCATATATACCTATTTATATATATCTATA7702274GGGCCTTCATGTGATTTGATATATGGTTAATTTGGTGACCCTTAAAATGG
Notocelia cynosbatella genome assembly, chromosome: 5.
OZ280808.1:25613982-25614001
GTGCTTATTGATTATAAATTTTACTCAAAC25613982GGGCCTTCATGTGATTTGATGGTTACGAGTTAGTAACAAGTGTAAACAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCAAATCACATGAAGGCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCAAATCACATGAAGGCCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.636 | 0.627 | search_plus_done; http://172.18.8.135:50900/match?q=ATCAAATCACATGAAGGCCC&k=0&no_gap=0&offset=0&limit=50
1.241 | 0.605 | search_minus_done; http://172.18.8.135:50900/match?q=GGGCCTTCATGTGATTTGAT&k=0&no_gap=0&offset=0&limit=48
1.244 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).