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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 18:00:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Nemoura dubitans genome assembly, chromosome: 2.
OV121075.1:27997568-27997587
AGTAGAGTTGTCAGCTGTTTTGGAGACTGG27997568ATCAACCGCATCACGTTTTTTGGGGGTAACGCTTCACACTCCAAGTACCG
Trifolium repens mRNA, clone: WCC11j07_006, unspecified EST.
FY458021.1:436-455
CCCATTTGAGGAATGTTACTGAAAATGGAA436AAAAACGTGATGCGGTTGATAAAGTTGGAAACTTGTTTTTAGGGAAAAAT
Xanthomonas dyei strain 22-321 chromosome, complete genome.
CP103837.1:4952890-4952909
GGCTCCTGCAAATGATGATCGATATCAGGG4952890AAAAACGTGATGCGGTTGATGGAACGTCGCGAGCGGCCACGCAGTGATTG
Xanthomonas dyei strain 22-325 chromosome, complete genome.
CP103840.1:4952999-4953018
GGCTCCTGCAAATGATGATCGATATCAGGG4952999AAAAACGTGATGCGGTTGATGGAACGTCGCGAGCGGCCACGCAGTGATTG
Tipula confusa genome assembly, chromosome: 2.
OY744476.1:164863168-164863187
AAATCAATGACAAGCACACCGTGTCACAAA164863168AAAAACGTGATGCGGTTGATTATACCAGTATGATATTATATGCTCTACGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCAACCGCATCACGTTTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCAACCGCATCACGTTTTT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.120 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=ATCAACCGCATCACGTTTTT&k=0&no_gap=0&offset=0&limit=50
0.267 | 0.147 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAACGTGATGCGGTTGAT&k=0&no_gap=0&offset=0&limit=49
0.270 | 0.003 | cgi_end;

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