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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 16:08:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 3 from patent US 7193132.
EA101768.1:706-725
GGACAGGAGCTTCATGGTGGCAGTGGCTGC706ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Sequence 3 from patent US 7585950.
GP565175.1:706-725
GGACAGGAGCTTCATGGTGGCAGTGGCTGC706ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Sequence 5934 from patent US 7750207.
GX311859.1:694-713
GGACAGGAGCTTCATGGTGGCAGTGGCTGC694ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Sequence 5935 from patent US 7750207.
GX311860.1:641-660
GGACAGGAGCTTCATGGTGGCAGTGGCTGC641ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Sequence 5936 from patent US 7750207.
GX311861.1:524-543
GGACAGGAGCTTCATGGTGGCAGTGGCTGC524ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Sequence 5937 from patent US 7750207.
GX311862.1:825-844
GGACAGGAGCTTCATGGTGGCAGTGGCTGC825ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Sequence 3 from patent US 8088973.
GZ042450.1:706-725
GGACAGGAGCTTCATGGTGGCAGTGGCTGC706ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Sequence 3 from patent US 8637732.
HK308774.1:706-725
GGACAGGAGCTTCATGGTGGCAGTGGCTGC706ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
PAC000000000446 Pioneer AF-1 array Zea mays cDNA, mRNA sequence.
BM500231.1:379-398
GGACAGGAGCTTCATGGTGGCAGTGGCTGC379ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
1091042A08.y1 1091 - Immature ear with common ESTs screened by Schmidt lab Zea mays cDNA, mRNA sequence.
BQ295728.1:299-318
GGACAGGAGCTTCATGGTGGCAGTGGCTGC299ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
OK-YZ-B503 Bermudagrass cv. Jackpot SSH Library Cynodon dactylon cDNA clone JN-23.M13, mRNA sequence.
BQ825967.1:125-144
GGTCAGGAGCTTAACGGTGGCAGTGGCTGC125ATCACAAGCATCCTGAAGGGCAACCCTCCAGAAATGGATGGGTACACTTA
OK-YZ-B504 Bermudagrass cv. Jackpot SSH Library Cynodon dactylon cDNA clone JN-124.M13, mRNA sequence.
BQ825968.1:125-144
GGTCAGGAGCTTAACGGTGGCAGTGGCTGC125ATCACAAGCATCCTGAAGGGCAACCCTCCAGAAATGGATGGGTACACTTA
946141D04.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence.
BU037714.1:329-348
GGACAGGAGCTTCATGGTGGCAGTGGCTGC329ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
946182F02.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence.
BU645313.1:332-351
GGACAGGAGCTTCATGGTGGCAGTGGCTGC332ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
1114032G07.y2 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence.
CA828734.1:208-227
GGACAGGAGCTTCATGGTGGCAGCGGCTGC208ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
1114037F02.y2 1114 - Unigene IV from Maize Genome Project Zea mays cDNA, mRNA sequence.
CA829100.1:326-345
GGACAGGAGCTTCATGGTGGCAGTGGCTGC326ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
3529_1_66_1_C07.y_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence.
CB616896.1:568-587
GGACAGGAGCTTCATGGTGGCAGTGGCTGC568ATCACAAGCATCCTGAAGGGCACCCC
QAZ2c06.yg QAZ Zea mays cDNA clone QAZ2c06, mRNA sequence.
CD990930.1:364-383
GGACAGGAGCTTCATGGTGGCAGTGGCTGC364ATCACAAGCATCCTGAAGGGCACCCCTTCGGGACATGGATGGCTATTCCA
MZCCL10028B04.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence.
CO441177.1:362-381
GGACAGGAGCTTCATGGTGGCAGTGGCTGC362ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
MZCCL15008H12.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence.
CO455095.1:442-461
GGACAGGAGCTTCATGGTGGCAGTGGCTGC442ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
3530_1_193_1_E08.y_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence.
CO529283.1:665-684
GGACAGGAGCTTCATGGTGGCAGTGGCTGC665ATCACAAGCATCCTGAAGGG
ZM_BFb0029N14.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
DR804670.1:655-674
GGACAGGAGCTTCATGGTGGCAGTGGCTGC655ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
s13dFA37H11ST096_418913 Tall fescue, Festuca arundinacea Schreb, stems Festuca arundinacea cDNA, mRNA sequence.
DT710212.1:418-437
GAACAGGAGCTCCATGGTGGCAGTAGCTGC418ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
ZM_BFb0160O24.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
DV164464.1:661-680
GGACAGGAGCTTCATGGTGGCAGTGGCTGC661ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGAT
ZM_BFb0209H05.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
DV523293.1:676-695
GGACAGGAGCTTCATGGTGGCAGTGGCTGC676ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
ZM_BFb0382D23.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
EB167403.1:23-42
GCTTCATGGTGGCAGTGGCTGC23ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
_32X_E10 Bermudagrass Normalized cDNA Library Cynodon dactylon cDNA 5', mRNA sequence.
ES298520.1:687-706
GGTCAGGAGCTTAACGGTGGCAGTGGCTGC687ATCACAAGCATCCTGAAGGGCAACCCTCCAGAAATGGATGGGTACCCCAT
25678506 CERES-227 Zea mays cDNA clone 475319 3', mRNA sequence.
FL459805.1:140-159
GGACAGGAGCTTCATGGTGGCAGTGGCTGC140ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
1453851 CERES-196 Zea mays cDNA clone 277474 3', mRNA sequence.
FL466619.1:103-122
GGACAGGAGCTTCATGGTGGCAGTGGCTGC103ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
CLS_cLiFpEfI12na_10a1_1_k15cLibkit5LD_F08 CLS_cLiFpEfI12na_plant Festuca pratensis cDNA clone 10k15 5', mRNA sequence.
GO791672.1:876-895
GAACAGGAGCTCCATGGTGGCAGTAGCTGC876ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_cLiFpEfI12na_63a4_1_p16cLibkit5LD_H08 CLS_cLiFpEfI12na_plant Festuca pratensis cDNA clone 63p16 5', mRNA sequence.
GO802013.1:608-627
GAACAGGAGCTCCATGGTGGCAGTAGCTGC608ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_34a3_1_p07cLibkit5LD_H04 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 34p07 5', mRNA sequence.
GO859194.1:499-518
GAACAGGAGCTCCATGGTGGCAGTAGCTGC499ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_40a3_1_j17cLibkit5LD_E09 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 40j17 5', mRNA sequence.
GO861792.1:668-687
GAACAGGAGCTCCATGGTGGCAGTAGCTGC668ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_53a2_1_e08cLibkit5LD_C04 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 53e08 5', mRNA sequence.
GO866448.1:362-381
GAACAGGAGCTCCATGGTGGCAGTAGCTGC362ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_55a4_1_d04cLibkit5LD_B02 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 55d04 5', mRNA sequence.
GO867611.1:796-815
GAACAGGAGCTCCATGGTGGCAGTAGCTGC796ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_58a2_2_k22cLibkit5LD_F11 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 58k22 5', mRNA sequence.
GO869448.1:794-813
GAACAGGAGCTCCATGGTGGCAGTAGCTGC794ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_58a3_2_n21cLibkit5LD_G11 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 58n21 5', mRNA sequence.
GO869552.1:794-813
GAACAGGAGCTCCATGGTGGCAGTAGCTGC794ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_64a3_1_n13cLibkit5LD_G07 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 64n13 5', mRNA sequence.
GO872704.1:768-787
GAACAGGAGCTCCATGGTGGCAGTAGCTGC768ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_69a3_1_d09cLibkit5LD_B05 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 69d09 5', mRNA sequence.
GO874809.1:794-813
GAACAGGAGCTCCATGGTGGCAGTAGCTGC794ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_CLiFpEfSpn_92a4_1_j18cLibkit5LD_E09 CLS_CLiFpEfSPn_plant Festuca pratensis cDNA clone 92j18 5', mRNA sequence.
GO884051.1:215-234
GAACAGGAGCTCCATGGTGGCAGTAGCTGC215ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
RDD_cLiFpEfI12nb_3x1_2_G10_cLibkit5_D05 RDD_cLiFpEfI12nb_plant Festuca pratensis cDNA clone 3G10 5', mRNA sequence.
GO894702.1:412-431
GAACAGGAGCTCCATGGTGGCAGTAGCTGC412ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
RDD_cLiFpEfI12nb_3x1_4_B16_cLibkit5_A08 RDD_cLiFpEfI12nb_plant Festuca pratensis cDNA clone 3B16 5', mRNA sequence.
GO894828.1:412-431
GAACAGGAGCTCCATGGTGGCAGTAGCTGC412ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_cLiFproots_11a2_1_k12cLibkit5LD_F06 CLS_cLiFproots_plant Festuca arundinacea cDNA clone 11k12 5', mRNA sequence.
GT033002.1:496-515
GAACAGGAGCTCCATGGTGGCAGTAGCTGC496ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_cLiFproots_15a4_1_p10cLibkit5LD_H05 CLS_cLiFproots_plant Festuca arundinacea cDNA clone 15p10 5', mRNA sequence.
GT034636.1:159-178
GAACAGGAGCTCCATGGTGGCAGTAGCTGC159ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CLS_cLiFproots_7a4_1_n04cLibkit5LD_G02 CLS_cLiFproots_plant Festuca arundinacea cDNA clone 7n04 5', mRNA sequence.
GT051047.1:788-807
GAACAGGAGCTCCATGGTGGCAGTAGCTGC788ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
CCXG2361.b1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG2361 5', mRNA sequence.
GT786059.1:62-81
GAGCAGGAGCTTCATGGTGGCAGTAACTGC62ATCACAAGCATCCTGAAGGGCATGCCTGTTGACATGGATGGATACCTCAT
CCXG8214.b1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG8214 5', mRNA sequence.
GT796775.1:149-168
GAGCAGGAGCTTCATGGTGGCAGTAACTGC149ATCACAAGCATCCTGAAGGGCATGCCTGTTGACATGGATGGATACCTCAT
CCYO5450.b1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDNA clone CCYO5450 5', mRNA sequence.
GT819382.1:10-29
AGTAACTGC10ATCACAAGCATCCTGAAGGGCATGCCTGTTGACATGGATGGATACCTCAT
CCYP11306.b1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA clone CCYP11306 5', mRNA sequence.
GT856009.1:639-658
GAGCAGGAGCTTCATGGTGGCAGTTACTGC639ATCACAAGCATCCTGAAGGGCATGCCTGTTGGACATGGATGGATACCTCA
BG04066B1B03.f1 BG04- primary and normalized libraries Dactylis glomerata cDNA, mRNA sequence.
HO151982.1:63-82
GAACAGGAGCTTCATGGTGGCAGTAGCTGC63ATCACAAGCATCCTGAAGGGCACGCCTGCTGACATGGATAGATACCTCAT
BG04083B2B05.f1 BG04- primary and normalized libraries Dactylis glomerata cDNA, mRNA sequence.
HO165223.1:232-251
GAACAGGAGCTTCATGGTGGCAGTAGCTGC232ATCACAAGCATCCTGAAGGGCACGCCTGCTGACATGGATAGATACCTCAT
TSA: Zea mays contig39070, mRNA sequence.
EZ103413.1:151-170
GGACAGGAGCTTCATGGTGGCAGTGGCTGC151ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
TSA: Agrostis stolonifera AST_13129 mRNA sequence.
JU103415.1:237-256
GAACAGGAGCTTCATGGTGGCAGTGGCTGC237ATCACAAGCATCCTGAAGGGCACGCCTGCTGACATGGATGGATACCTCAT
PUIAH07TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa0537B14, genomic survey sequence.
CG170071.1:210-229
GGACAGGAGCTTCATGGTGGCAGTGGCTGC210ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
DB038N08_F1.ab1 Brachypodium distachyon Bd21 BamHI BAC library Brachypodium distachyon genomic clone DB038N08, genomic survey sequence.
EI119688.1:521-540
GAGCAGGAGCTTCATGGTGGCAGTAACTGC521ATCACAAGCATCCTGAAGGGCATGCCTGTTGACATGGATGGATACCTCAT
DH118O08.F Brachypodium distachyon Bd21 BamH1 BAC library DB Brachypodium distachyon genomic clone DB118O08.F 5', genomic survey sequence.
GS137527.1:531-550
GAGCAGGAGCTTCATGGTGGCAGTAACTGC531ATCACAAGCATCCTGAAGGGCATGCCTGTTGACATGGATGGATACCTCAT
Zea mays PCO132275 mRNA sequence.
AY104893.1:669-688
GGACAGGAGCTTCATGGTGGCAGTGGCTGC669ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Zea mays cultivar B73 chromosome 3 clone CH201-150O18, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC182617.4:126204-126223
GGACAGGAGCTTCATGGTGGCAGTGGCTGC126204ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Zea mays full-length cDNA clone ZM_BFb0147O12 mRNA, complete cds.
BT036926.1:781-800
GGACAGGAGCTTCATGGTGGCAGTGGCTGC781ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Zea mays full-length cDNA clone ZM_BFb0374B19 mRNA, complete cds.
BT039131.1:729-748
GGACAGGAGCTTCATGGTGGCAGTGGCTGC729ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Zea mays full-length cDNA clone ZM_BFb0009E10 mRNA, complete cds.
BT060513.1:687-706
GGACAGGAGCTTCATGGTGGCAGTGGCTGC687ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Zea mays full-length cDNA clone ZM_BFb0353K20 mRNA, complete cds.
BT068640.1:834-853
GGACAGGAGCTTCATGGTGGCAGTGGCTGC834ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Zea mays full-length cDNA clone ZM_BFb0029N14 mRNA, complete cds.
BT087286.1:655-674
GGACAGGAGCTTCATGGTGGCAGTGGCTGC655ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Zea mays cultivar LT2357 chromosome 3.
CP116741.1:131111755-131111774
GGACAGGAGCTTCATGGTGGCAGTGGCTGC131111755ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 3.
CP125975.1:361888470-361888489
GAACAGGAGCTTCATGGTGGCAGTAGCTGC361888470ATCACAAGCATCCTGAAGGGCACACCTGCTGACATGGATGGATACCTCAT
Zea mays clone 277474 MYB59 mRNA, complete cds.
EU964272.1:677-696
GGACAGGAGCTTCATGGTGGCAGTGGCTGC677ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Zea mays clone UT1131 MYB transcription factor mRNA, partial cds.
HQ858675.1:463-482
GGACAGGAGCTTCATGGTGGCAGTGGCTGC463ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
Zea mays clone pUT5678 MYB transcription factor (MYB56) mRNA, partial cds.
KJ727737.1:463-482
GGACAGGAGCTTCATGGTGGCAGTGGCTGC463ATCACAAGCATCCTGAAGGGCACCCCTCCGGACATGGATGGCTATCCCAT
Zea mays genome assembly, chromosome: 3.
LR897969.1:132100223-132100242
GGACAGGAGCTTCATGGTGGCAGTGGCTGC132100223ATCACAAGCATCCTGAAGGGCACCCATCCGGACATGGATGGCTATCCCAT
UNVERIFIED: Dactylis glomerata isolate comp52868_c0 mRNA sequence, sequence.
MG495930.1:905-924
GAACAGGAGCTTCATGGTGGCAGTAGCTGC905ATCACAAGCATCCTGAAGGGCACGCCTGCTGACATGGATAGATACCTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCACAAGCATCCTGAAGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCACAAGCATCCTGAAGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.848 | 2.840 | search_plus_done; http://172.18.8.135:50400/match?q=ATCACAAGCATCCTGAAGGG&k=0&no_gap=0&offset=0&limit=50
3.005 | 0.157 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTTCAGGATGCTTGTGAT&k=0&no_gap=0&offset=0&limit=0
3.005 | 0.000 | cgi_end;

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