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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:08:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Populus nigra genome assembly, chromosome: 16.
OX637687.1:760792-760810
TAGCTGGAACAATCATGAAGCTACCTGATT760792ATCACCAAAAGCACCACGGCTATCACCATATGGGTTTCCAGGCCTGTGG
Pseudomonas sp. ACM7 chromosome.
CP024866.1:570235-570253
GTGTTGGCCAACAGCATCCCGGCGGCGGCA570235ATCACCAAAAGCACCACGGCGGCAATCCCGACGATGCTTAGCACCACGC
Shinella sumterensis strain 1760953 plasmid unnamed1, complete sequence.
CP132303.1:1149722-1149740
CGATAACTCAGGCTGCCGACAAGAAGCACG1149722ATCACCAAAAGCACCACGGAGAGCGCCGCGGCATAGCCGAAATCGCCGA
Craniophora ligustri genome assembly, chromosome: 5.
LR990959.1:978178-978196
ATTAGAACGACGTCTGAAAGGACTACTGAA978178ATCACCAAAAGCACCACGGCGAGTAGTACAATAACCAATACATTAACCA
Amaurobius ferox genome assembly, chromosome: 14.
OX578149.1:25563139-25563157
TGGTGTGTTGTCGTCCATGAAAACAAATTC25563139ATCACCAAAAGCACCACGGAAAAGGCTAATACGAGGCAGTAGAACTTCA
Anopheles arabiensis genome assembly, chromosome: 2.
OZ001348.1:2554743-2554761
AGTTTCATCACGACTCCATCACGTTGATCA2554743ATCACCAAAAGCACCACGGAGCTGTGGGCATGCTAAACAAAAAATGTAA
Maratus michaelseni genome assembly, chromosome: 3.
OZ007589.1:105360699-105360717
TGGTTCGTTGTCGTCCATGAAAACAAATTT105360699ATCACCAAAAGCACCACGGAAAAGGGAACATGAGGAAATAGAACTTCAT
Jasminum sambac cultivar Hutoumoli linkage group Lg8.
CP073651.1:23136875-23136893
CATATATGAAGCAAATGACATAGCACTTGG23136875CCGTGGTGCTTTTGGTGATCTATAACCTCCCTCCATGGCTGTCCATGAA
Manihot esculenta starch synthase isoform I (SSI) mRNA, complete cds.
EF667960.1:707-725
CCATAGACCTGGAAATCCATATGGTGATAG707CCGTGGTGCTTTTGGTGATAATCAGTTTCGTTTCACTTTACTCTGCCAT
Manihot esculenta AT1G02020 mRNA, partial sequence.
KY524588.1:324-342
CCATAGACCTGGAAATCCATATGGTGATAG324CCGTGGTGCTTTTGGTGATAATCAGTTTCGTTTCACTTTACTCTGCCAT
Anopheles coluzzii genome assembly, chromosome: 3.
OX030892.1:92712805-92712823
TTACATTTTTTTGTTTAGCATGCCACACCT92712805CCGTGGTGCTTTTGGTGATTGATCAACGTGATGGAGTCGTGATGGAGCT
Anopheles gambiae genome assembly, chromosome: 3.
OX030908.1:96651451-96651469
TTTACATTTTTTGTTTAGCATGCCACACCT96651451CCGTGGTGCTTTTGGTGATTGATCAACGTGATGGAGTCGTGATGGAACT
Nephrocerus scutellatus genome assembly, chromosome: 5.
OX352765.1:14665028-14665046
CGAGATATTTAACCTCACTGGAATAATCTA14665028CCGTGGTGCTTTTGGTGATGATATGTCCCAACTTGGATAGTCTTCTTAT
Protonemura montana genome assembly, chromosome: 2.
OX387603.1:11623880-11623898
CGAAGAAAGTTGTTCGGATACAATTCCATC11623880CCGTGGTGCTTTTGGTGATGAGATATATAAAGCAGACAAATCCAACTGG
Amaurobius ferox genome assembly, chromosome: 11.
OX578146.1:101221807-101221825
TGAAGTTCTACAGCCTCATGTTCGCCTTTT101221807CCGTGGTGCTTTTGGTGATAAATTTGTTTTCATGGAACACAAAGCACCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCACCAAAAGCACCACGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCACCAAAAGCACCACGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.179 | 0.171 | search_plus_done; http://172.18.8.135:50400/match?q=ATCACCAAAAGCACCACGG&k=0&no_gap=0&offset=0&limit=50
0.292 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=CCGTGGTGCTTTTGGTGAT&k=0&no_gap=0&offset=0&limit=43
0.297 | 0.005 | cgi_end;

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