GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 21:59:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Astatotilapia calliptera genome assembly, chromosome: 22.
LS420039.2:14783627-14783646
GTTAAGGTCAAACCTGTGGGCCTCACCCAT14783627ATCACCAACATCCCCATGATTCCCACACTCAGGCTTACTTTGGCTGCAAG
Neolamprologus multifasciatus genome assembly, chromosome: 22.
OY755031.1:16801278-16801297
GTTAAGGTCAAACCTGTGGGCCTCACCCAT16801278ATCACCAACATCCCCATGATTCCCACACTCAGGCTTACTTTGGCTGCAAG
TSA: Arachis duranensis DurSNP_c19703.Ardu mRNA sequence.
HP019683.1:412-431
TCCCGAACTCTCGTAGTGTGCCCTGCTTCC412ATCACCAACATCCCCATGATGGAGCCTTCTTCTCAGTGTTCTTGATGACA
TSA: Arachis hypogaea Ahy.Unigene8953 mRNA sequence.
JR549363.1:222-241
TCCCGAACTCTCGTAGTGCGCCCTGCTTCT222ATCACCAACATCCCCATGATGGAGCCTTCTTCTCAGTGTTCTTGATGACA
ICPM1G01 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1G01 5', genomic survey sequence.
FI131390.1:217-236
AGAGCATGCCCCACTGAAGCCTTAAGCCTC217ATCACCAACATCCCCATGATGCTGATCATCTGCAACATAATTTAAAACAT
CccaBa005-O10TR CccABa Cajanus cajan genomic clone CccaBa005-O10, genomic survey sequence.
FI194322.1:84-103
AGAGCATGCCCAACTGAAACCTTAATCCTC84ATCACCAACATCCCCATGATGATGATCACCTGTAACACAATTTAAACATG
CccaBa061-C5TR CccABa Cajanus cajan genomic clone CccaBa061-C5, genomic survey sequence.
FI213982.1:97-116
AGAGCATGCCCCACTGAAGCCTTAAGCCTT97ATCACCAACATCCCCATGATGCTGATCATCTGCAACACAATTTAAAACAT
CccaBa049-F16TV CccABa Cajanus cajan genomic clone CccaBa049-F16, genomic survey sequence.
FI224357.1:118-137
AGAGCATGCCCCACTGAAGCCTTAAGCCTC118ATCACCAACATCCCCATGATGCTGATCATCTGCAACATAATTTAAAACAT
Arachis duranensis BAC ADH179B13, 6 unordered pieces.
HF937573.1:80883-80902
TCCCGAACTCTCGTAGTGTGCCCTGCTTCT80883ATCACCAACATCCCCATGATGGAGCCTTCTTCTCAGTGTTCTTGATGACA
Aegilops umbellulata cultivar TA1851 chromosome 3U.
CP136056.1:538172915-538172934
GGTGCACACAAGAAGGCAGGCATGTCCGCC538172915ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCTGGC
Triticum aestivum genome assembly, chromosome: 3A.
LR862514.1:710117585-710117604
GGTGCACACAAGAAGGCAGGCATGTACGCC710117585ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGNN
Triticum aestivum genome assembly, chromosome: 3A.
LR862535.1:703274039-703274058
GGTGCACACAAGAAGGCAGGCATGTACGCC703274039ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
LR862556.1:707030840-707030859
GGTGCACACAAGAAGGCAGGCATGTACGCC707030840ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAT
Triticum aestivum genome assembly, chromosome: 3A.
LR865464.1:696217317-696217336
GGTGCACACAAGAAGGCAGGCATGTACGCC696217317ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3D.
LR865466.1:569392364-569392383
TGGTGCACACAAGAAGGTAGGCATGTCGCC569392364ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTATTTCGGGC
Triticum aestivum genome assembly, chromosome: 3A.
LR865485.1:698794579-698794598
GGTGCACACAAGAAGGCAGGCATGTACGCC698794579ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
LR865506.1:711477908-711477927
GGTGCACACAAGAAGGCAGGCATGTACGCC711477908ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
LR865745.1:713010401-713010420
GGTGCACACAAGAAGGCAGGCATGTACGCC713010401ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
LR877315.1:708492300-708492319
GGTGCACACAAGAAGGCAGGCATGTACGCC708492300ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
LR878441.1:711374222-711374241
GGTGCACACAAGAAGGCAGGCATGTACGCC711374222ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
LS992086.1:710716477-710716496
GGTGCACACAAGAAGGCAGGCATGTACGCC710716477ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
OU015727.1:712343671-712343690
GGTGCACACAAGAAGGCAGGCATGTACGCC712343671ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
OU343171.1:712627902-712627921
GGTGCACACAAGAAGGCAGGCATGTACGCC712627902ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
OU963878.1:710737357-710737376
GGTGCACACAAGAAGGCAGGCATGTACGCC710737357ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
OV100743.1:704530287-704530306
GGTGCACACAAGAAGGCAGGCATGTACGCC704530287ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
OW530316.1:704530287-704530306
GGTGCACACAAGAAGGCAGGCATGTACGCC704530287ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum aestivum genome assembly, chromosome: 3A.
OX637231.1:581757487-581757506
GGTGCACACAAGAAGGCAGGCATGTACGCC581757487ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Triticum monococcum genome assembly, chromosome: 3A.
OY737852.1:770028775-770028794
GGTGCACACAAGAAGGCAGGCATGTCCGCC770028775ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGGC
Triticum monococcum genome assembly, chromosome: 3A.
OY737860.1:766730631-766730650
GGTGCACACAAGAAGGCAGGCATGTCCGCC766730631ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGGC
Triticum timopheevii genome assembly, chromosome: 4At.
OY997267.1:718578300-718578319
GGTGCACACAAGAAGGCAGGCATGTACGCC718578300ATCACCAACATCCCCATGATCATGTATCTTACGCCTTGGTTCTTTCAGAC
Lathyrus sativus genome assembly, chromosome: 2.
OZ012736.1:73520619-73520638
AATCACTCCATATCACTGAACCTGACGCAC73520619ATCACCAACATCCCCATGATAAACCGTCAACAGCCGCAGCTTGGCTCGCA
Shargacucullia verbasci genome assembly, chromosome: 2.
OX387282.1:4800853-4800872
AGGCGCTCCTTTGCACCGGGACTCACTGAA4800853ATCACCAACATCCCCATGATTGGCATGTCGACAAAAATTTTACTTCATTA
Stenodema calcarata genome assembly, chromosome: 7.
OY986054.1:16490746-16490765
ATTTGTGGTGCAGCCCATCAAATAACCCTC16490746ATCACCAACATCCCCATGATTAACACCTTGCATATTTGAATATTAGAAAT
Dur25.root.ADAA-aaf07c03.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence.
GW931928.1:143-162
TGTCATCAAGAACACTGAGAAGAAGGCTCC143ATCATGGGGATGTTGGTGATGGAAGCAGGGCACACTACGAGAGTTCGGGA
DSL_000061 Developing seed cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpga0_0001_F08.ab1, mRNA sequence.
JK146981.1:102-121
TGTCATCAAGAACACTGAGAAGAAGGCTCC102ATCATGGGGATGTTGGTGATAGAAGCAGGGCGCACTACGAGAGTTCGGGA
DSL_015111 Developing seed cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpga0_0205_G12.ab1, mRNA sequence.
JK162031.1:154-173
TGTCATCAAGAACACTGAGAAGAAGGCTCC154ATCATGGGGATGTTGGTGATAGAAGCAGGGCGCACTACGAGAGTTCGGGA
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:86647636-86647655
TGTCATCAAGAACACTGAGAAGAAGGCTCC86647636ATCATGGGGATGTTGGTGATAGAAGCAGGGCACACTACGAGAGTTCGGGA
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:112185224-112185243
TGTCATCAAGAACACTGAGAAGAAGGCTCC112185224ATCATGGGGATGTTGGTGATAGAAGCAGGGCGCACTACGAGAGTTCGGGA
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:111322138-111322157
TGTCATCAAGAACACTGAGAAGAAGGCTCC111322138ATCATGGGGATGTTGGTGATAGAAGCAGGGCGCACTACGAGAGTTCGGGA
Triticum aestivum genome assembly, chromosome: 3D.
LR862516.1:573902225-573902244
GCCCGAAATAACCAAGGCGTAAGATACATG573902225ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LR862537.1:575044330-575044349
GCCCGAAATAACCAAGGCGTAAGATACATG575044330ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LR862558.1:580344477-580344496
GCCCGAAATAACCAAGGCGTAAGATACATG580344477ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LR865487.1:582561246-582561265
GCCCGAAATAACCAAGGCGTAAGATACATG582561246ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LR865508.1:581015473-581015492
GCCCGAAATAACCAAGGCGTAAGATACATG581015473ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LR865747.1:587823369-587823388
GCCCGAAATAACCAAGGCGTAAGATACATG587823369ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3A.
LR865766.1:710125344-710125363
GTCTGAAAGAACCAAGGCGTAAGATACATG710125344ATCATGGGGATGTTGGTGATGGCGTACATGCCTGCCTTCTTGTGTGCACC
Triticum aestivum genome assembly, chromosome: 3D.
LR865768.1:571577980-571577999
GCCCGAAATAACCAAGGCGTAAGATACATG571577980ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LR877317.1:578580725-578580744
GCCCGAAATAACCAAGGCGTAAGATACATG578580725ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LR878443.1:573623807-573623826
GCCCGAAATAACCAAGGCGTAAGATACATG573623807ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
LS992088.1:574864115-574864134
GCCCGAAATAACCAAGGCGTAAGATACATG574864115ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum turgidum subsp. durum genome assembly, chromosome: 3A.
LT934115.1:701868114-701868133
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNG701868114ATCATGGGGATGTTGGTGATGGCGTACATGCCTGCCTTCTTGTGTGCACC
Triticum aestivum genome assembly, chromosome: 3D.
OU015729.1:600390013-600390032
GCCCGAAATAACCAAGGCGTAAGATACATG600390013ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
OU343185.1:591012432-591012451
GCCCGAAATAACCAAGGCGTAAGATACATG591012432ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
OU963880.1:582476850-582476869
GCCCGAAATAACCAAGGCGTAAGATACATG582476850ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Triticum aestivum genome assembly, chromosome: 3D.
OV100745.1:583221993-583222012
GTCTGAAAGAACCAAGGCGTAAGATACATG583221993ATCATGGGGATGTTGGTGATGGCGTACATGCCTGCCTTCTTGTGTGCACC
Triticum aestivum genome assembly, chromosome: 3D.
OW530318.1:583221993-583222012
GTCTGAAAGAACCAAGGCGTAAGATACATG583221993ATCATGGGGATGTTGGTGATGGCGTACATGCCTGCCTTCTTGTGTGCACC
Triticum aestivum genome assembly, chromosome: 3D.
OX637233.1:444382443-444382462
GCCCGAAATAACCAAGGCGTAAGATACATG444382443ATCATGGGGATGTTGGTGATGGCGACATGCCTACCTTCTTGTGTGCACCA
Calendula officinalis genome assembly, chromosome: 2.
OY970821.1:72379490-72379509
CGATCGGGACCATTCAAGAACAAAGCAATG72379490ATCATGGGGATGTTGGTGATGCAATCCCGGTATATCAACTGATTTAGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCACCAACATCCCCATGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCACCAACATCCCCATGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.236 | 0.227 | search_plus_done; http://172.18.8.135:50400/match?q=ATCACCAACATCCCCATGAT&k=0&no_gap=0&offset=0&limit=50
0.505 | 0.269 | search_minus_done; http://172.18.8.135:50400/match?q=ATCATGGGGATGTTGGTGAT&k=0&no_gap=0&offset=0&limit=17
0.522 | 0.016 | cgi_end;

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