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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:11:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chionomys nivalis genome assembly, chromosome: 10.
OX465458.1:4216941-4216959
TCTGGAAGATATGACAATTCACAGCAACTC4216941ATCACCACCAGCAGCAAAGCAAACCAGCTCGTGTGCTCTGCAGCCAGTG
Chionomys nivalis genome assembly, chromosome: 13.
OX465461.1:66103661-66103679
GCAATCAGTGTGGAAGTTAAAAGACAGCAC66103661ATCACCACCAGCAGCAAAGAGAACAGCAAGGCAACCCCAGCTTCCTTGC
Capricornis sumatraensis isolate serow.1 chromosome 3.
CP135628.1:123465704-123465722
TTCTCATGCTATCCCCTTCCCCACTCCCAC123465704ATCACCACCAGCAGCAAAGGCAAAGTACGCCTGCCTTTGCCCCAGACCT
Epinephelus fuscoguttatus DNA, LG9, complete sequence.
AP022683.1:32777217-32777235
AATGTGTACGTAAAATAGAACATACAACAC32777217ATCACCACCAGCAGCAAAGATTAAAACTAGATAATGTGTCATGTTTTTA
Mastacembelus armatus genome assembly, chromosome: 15.
LR535847.1:4600856-4600874
TCAAAAAAAGGAATTTCATTACATTCCTAC4600856ATCACCACCAGCAGCAAAGTAAACGTGTTACATTACTCGCTTGTTTACT
Caprimulgus europaeus genome assembly, chromosome: 5.
OU015528.1:24179473-24179491
AAACATTTTGGTGAATAAGACATTGCATAT24179473ATCACCACCAGCAGCAAAGTACCACAACACCCAGCTCTTTAAAGAGCTA
Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 4.
OU383777.1:26896934-26896952
GAACATTTCAGTGAATAAGATATCTCCTGT26896934ATCACCACCAGCAGCAAAGTACCGCAGCACACAGCTCATTAAAAGATGT
Cinclus cinclus genome assembly, chromosome: 4.
OY759681.1:37386252-37386270
GAATATTTCAGTGAATAAGACATTGCCTGT37386252ATCACCACCAGCAGCAAAGTGCCACAGCACACAGCTCATTAAAAGAGCT
AGENAE Rainbow trout multi-tissues - normalized + 1 subtraction (tcay) clone tcay0022.l.08, 5prim end (M13R primer).
BX309867.3:658-676
ACGAGAAGGACCACCACTCCAGACAGCACC658ATCACCACCAGCAGCAAAGACACAGCAGCTCACACAAACTCAGTGGGAG
AGENAE Rainbow trout multi-tissues - normalized + 1 subtraction (tcay) clone tcay0038.a.18, 5prim end (M13R primer).
BX320201.3:361-379
ACGAGAAGGACCACCACTCCAGACAGCACC361ATCACCACCAGCAGCAAAGACACAGCAGCTCACACAAACTCAGTGGGAG
010513AAXA002324HT (AAXA) Royal Gala 126 DAFB fruit core Malus domestica cDNA clone AAXA002324, mRNA sequence.
CN891115.1:177-195
AGTTAGATCAGTTGCCACTGAAGCAGCAGC177ATCACCACCAGCAGCAAAGATGGTCAAAGCCATCCGAATCCATGAACAT
010604AAXA005613HT (AAXA) Royal Gala 126 DAFB fruit core Malus domestica cDNA clone AAXA005613, mRNA sequence.
CN892663.1:181-199
AGTTAGATCAGTTGCCACTGAAGCAGCAGC181ATCACCACCAGCAGCAAAGATGGTCAAAGCCATCCGAATCCATGAACAT
021018ABCA005216HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA005216, mRNA sequence.
CN903560.1:82-100
AGTTAGATCAGTTGCCACTGAAGCAGCAGC82ATCACCACCAGCAGCAAAGATGGTCAAAGCCATCCGAATCCATGAACAT
010616AVBC006175HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC006175, mRNA sequence.
CN939789.1:209-227
AGTTAGATCAGTTGCCACTGAAGCAGCAGC209ATCACCACCAGCAGCAAAGATGGTCAAAGCCATCCGAATCCATGAACAT
PU2_plate10_K12 PU2 Prunus persica cDNA clone PU2_plate10_K12 5' similar to PU2_plate10_K12 similar to quinone oxidoreductase homolog - cowpea, mRNA sequence.
DW354276.1:125-143
AGTAGTTAGAGCACTTGCCACTGAATCAGC125ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
PU2_plate23_F07 PU2 Prunus persica cDNA clone PU2_plate23_F07 5' similar to PU2_plate23_F07 weakly similar to quinone oxidoreductase homolog - cowpea, mRNA sequence.
DW356209.1:194-212
AGTAGTTAGAGCACTTGCCACTGAATCAGC194ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
PU2_plate22_E08 PU2 Prunus persica cDNA clone PU2_plate22_E08 5' similar to PU2_plate22_E08 weakly similar to quinone oxidoreductase homolog - cowpea, mRNA sequence.
DW356939.1:194-212
AGTATTTAGAGCACTTGCCACTGAATCAGC194ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
010917ABEA001574HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA001574, mRNA sequence.
EB147523.1:282-300
AGTTAGATCAGTTGCCACTGAAGCAGCAGC282ATCACCACCAGCAGCAAAGATGGTCAAAGCCATCCGAATCCATGAACAT
PP1009A03-T7 PP1 Prunus persica cDNA clone PP1009A03, mRNA sequence.
FC861106.1:140-158
AGTAGTTAGAGCACTTGCCACTGAATCAGC140ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
PPN075F11-T7 PPN Prunus persica cDNA clone PPN075F11, mRNA sequence.
FC866748.1:74-92
AGTAGTTAGAGCACTTGCCACTGAATCAGC74ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
PPN075H01-T7 PPN Prunus persica cDNA clone PPN075H01, mRNA sequence.
FC866914.1:72-90
AGTAGTTAGAGCACTTGCCACTGAATCAGC72ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
PPN063B01-T7 PPN Prunus persica cDNA clone PPN063B01, mRNA sequence.
FC867127.1:147-165
AGTAGTTAGAGCACTTGCCACTGAATCAGC147ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
PPN013C03-T7 PPN Prunus persica cDNA clone PPN013C03, mRNA sequence.
FC867317.1:164-182
AGTAGTTAGAGCACTTGCCACTGAATCAGC164ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
Pm_0197 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW868771.1:230-248
AGTAGTTAGAGCACTTGCTACTGAATCAGC230ATCACCACCAGCAGCAAAGATGGTCACAGCCATTCGAGTCCATGAGCTT
TSA: Oncorhynchus mykiss 41837.Onmycontig, mRNA sequence.
EZ805171.1:52-70
ACGAGAAGGACCACCACTCCAGACAGCACC52ATCACCACCAGCAGCAAAGACACAGCAGCTCACACAAAACTCAGTGGGA
PP_LBa0014-N12.F PP_LBa Prunus persica genomic 5', genomic survey sequence.
FI966934.1:200-218
AGTAGTTAGAGCACTTGCCACTGAATCAGC200ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTT
Vitis vinifera contig VV78X097497.21, whole genome shotgun sequence.
AM427851.2:38477-38495
AAGAATCATTGCAGATATTGCCGGATGAAA38477ATCACCACCAGCAGCAAAGTGGAAGGAAGCACCTGCTCAATCCACCTCG
Vanrija pseudolonga isolate DUCC4014 chromosome 5.
CP086718.1:1637670-1637688
GAGCGGGACAGGGTGGTAACGAGTACCACC1637670ATCACCACCAGCAGCAAAGCCACCCATCGAGCAGCGCCTCGGACCGTCC
Vitis vinifera cultivar Pinot Noir 40024 chromosome 15.
CP126662.1:2579080-2579098
AAGAATCATTGCAGATATTGCCGGATGAAA2579080ATCACCACCAGCAGCAAAGTGGAAGGAAGCACCTGCTCAATCCACCTCG
Alnus glutinosa genome assembly, chromosome: 6.
OY340903.1:18533569-18533587
AAAGATGGGTGCTTGTTTTTCATGCAGATC18533569ATCACCACCAGCAGCAAAGAGCATAAGATTGGTTCACTTCAATGGCTAC
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:4992695-4992713
AGTTAGATCAGTTGCCACTGAAGCAGCAGC4992695ATCACCACCAGCAGCAAAGATGGTCAAAGCCATCCGAATCCATGAACAT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:3796906-3796924
AGTTAGATCAGTTGCCACTGAAGCAGCAGC3796906ATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAATCCACGAACAT
Thauera hydrothermalis, complete genome.
CP029331.1:363064-363082
TCGAAGCGGCTGATGTCAGCGTCTAGAGCC363064ATCACCACCAGCAGCAAAGAGGCGCCGATCATGATCGGGATTTCCTGGC
Pantoea sp. SO10 chromosome, complete genome.
CP040095.1:3043531-3043549
GCCATCGCCAGCAGATTGAGCGACAGGATG3043531ATCACCACCAGCAGCAAAGCGGTGGCGTAAACCAGCGGTCGATCAGCAT
Citrobacter portucalensis strain FDAARGOS_617 chromosome, complete genome.
CP044098.1:1761968-1761986
GGCAATGGCTCAGAACGTGCAACCAGCAGG1761968ATCACCACCAGCAGCAAAGCCAGCGCCGAACCAATCCAGTAAATCCAGG
Citrobacter sp. H12-3-2 chromosome, complete genome.
CP045837.1:4316395-4316413
GGCAATGGCTCAGAACGTGCAACCAGCAGG4316395ATCACCACCAGCAGCAAAGCCAGCGCCGAACCAATCCAGTAAATCCATG
Citrobacter sp. S40-1-2 chromosome, complete genome.
CP045840.1:4316395-4316413
GGCAATGGCTCAGAACGTGCAACCAGCAGG4316395ATCACCACCAGCAGCAAAGCCAGCGCCGAACCAATCCAGTAAATCCATG
Salmonella enterica strain 2014K-1020 chromosome, complete genome.
CP053584.1:2508737-2508755
GGCAGCGGCTCAGAGCGGGCAACCAGCAGG2508737ATCACCACCAGCAGCAAAGCCAGCGCCGAACCAATCCAGTAAATCCATG
Citrobacter freundii strain RHBSTW-00449 chromosome, complete genome.
CP056505.1:4545199-4545217
GGCAATGGCTCAGAACGGGCAATCAGCAGG4545199ATCACCACCAGCAGCAAAGCCAGTGCCGACCCGATCCAGTAAATCCAGG
Citrobacter freundii strain RHBSTW-00435 chromosome, complete genome.
CP056527.1:4303265-4303283
GGCAATGGCTCAGAACGGGCAATCAGCAGG4303265ATCACCACCAGCAGCAAAGCCAGTGCCGACCCGATCCAGTAAATCCAGG
Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. 01-0089 chromosome, complete genome.
CP074593.1:3917646-3917664
GGCAGCGGCTCAGAGCGGGCAACCAGCAGG3917646ATCACCACCAGCAGCAAAGCCAGCGCCGAACCAATCCAGTAAATCCATG
Pantoea sp. SOD02 chromosome, complete genome.
CP102604.1:2996527-2996545
GCCATCGCCAGCAAATTGAGCGACAGGATG2996527ATCACCACCAGCAGCAAAGCGGTGGCGTAAACCAGCGGTCGATCAGCAT
Paenarthrobacter sp. JL.01a chromosome, complete genome.
CP104877.1:3823178-3823196
TCAGCGGGATACCAGAGCCGGACTCCGATG3823178ATCACCACCAGCAGCAAAGCACCGAATACGCACGCCCACGCCTGTTTCA
Pantoea sp. SS70 chromosome, complete genome.
CP117199.1:3037777-3037795
GCCATCGCCAGCAGATTGAGCGACAGGATG3037777ATCACCACCAGCAGCAAAGCGGTGGCGTAAACCAGCGGTCGATCAGCAT
Pantoea sp. X85 chromosome, complete genome.
CP121108.1:3054961-3054979
GCCATCGCCAGCAGATTGAGCGACAGGATG3054961ATCACCACCAGCAGCAAAGCGGTGGCGTAAACCAGCGGTCGATCAGCAT
Pantoea sp. S18 chromosome 1, complete sequence.
CP142688.1:3115226-3115244
GCCATCGCCAGCAGATTGAGCGACAGGATG3115226ATCACCACCAGCAGCAAAGCGGTGGCGTAAACCAGCGGTCGATCAGCAT
Salmonella enterica subsp. arizonae strain NCTC7300 genome assembly, chromosome: 1.
LR133910.1:3876079-3876097
GGCAGCGGCTCAGAGCGGGCAACCAGCAGG3876079ATCACCACCAGCAGCAAAGCCAGCGCCGAACCAATCCAGTAAATCCATG
Salmonella enterica subsp. diarizonae strain NCTC10381 genome assembly, chromosome: 1.
LS483474.1:4391010-4391028
GGCAATGGCTCAGAACGTGCAACCAGCAGG4391010ATCACCACCAGCAGCAAAGCCAGCGCCGACCCGATCCAGTAAATCCATG
Oscheius sp. JU1382 genome assembly, chromosome: II.
OW051476.1:9387265-9387283
GTACTTTGCGCTCCAATAGCGATGATATCT9387265ATCACCACCAGCAGCAAAGAGCCGGCCTTGGCTGGTCTACTAATCAAGG
Sciurus carolinensis genome assembly, chromosome: 8.
LR738597.1:5837009-5837027
AGCTGGCCTGTGCTGTAGGATCCCACGTGC5837009CTTTGCTGCTGGTGGTGATGACTTACTGAGCGATAACTCGACACCAGCT
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:175670456-175670474
TACACATCTCAGTAGGCCTTTCGGGAATGG175670456CTTTGCTGCTGGTGGTGATGGTATTAAACATGTTTGTAGTTTTAACGAA
Plectropomus leopardus DNA, chromosome 7, nearly complete sequence.
AP022706.1:17846566-17846584
GTGTCTTTTTAACTTTGTGCTAGATGAAGT17846566CTTTGCTGCTGGTGGTGATGCTGACAGCATGTGATGCAAGTCCAGAAGG
Prunus dulcis DNA, pseudomolecule Pd02.
AP019298.1:22384521-22384539
AAGCTCATGGACTCGAATGGCTTTGACCAT22384521CTTTGCTGCTGGTGGTGATGCTGATTCAGTGGCAAGTGCTCTAACTACT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828088.1:323909769-323909787
AGGTTGTAGTCTTTGATCAACTCCAACCAT323909769CTTTGCTGCTGGTGGTGATCAACCTCGTGCGCCTAGGTCTCCGCCAGCC
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25373553-25373571
ATCTTCATGGATTCGGATGGCTTTGACCAT25373553CTTTGCTGCTGGTGGTGATGCTGCTGCTTCAGTGGCAACTGATCTAACT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX459971.1:326435906-326435924
AGGTTGTAGTCTTTGATCAACTCCAACCAT326435906CTTTGCTGCTGGTGGTGATCAACCTCGTGCGCCTAGGTCTCCGCCAGCC
Medicago lupulina genome assembly, chromosome: 6.
OY283144.1:53603756-53603774
CCAGACTAGAGAGCAGGAGATCAGGGACGA53603756CTTTGCTGCTGGTGGTGATAGGTCGAGGTATCACTTTGGGGAGGACTCT
Caenorhabditis sp. 34 TK-2017 DNA. chromosome 3, nearly complete genome.
AP018153.1:18450315-18450333
CCACGAGAATTCGAATTATAAGATGATGGC18450315CTTTGCTGCTGGTGGTGATGGTGGTTATGGTCAGATGGCGTCGATTGCG
Tenthredo mesomela genome assembly, chromosome: 4.
OX031016.1:19151064-19151082
GGTCCTGAGCAAACATGAAGCAAGGAGCAG19151064CTTTGCTGCTGGTGGTGATCCTGACGATCGCCATTGGAGTCAATTCAAC
Leucophora obtusa genome assembly, chromosome: 3.
OX465297.1:74883980-74883998
CTTGAAGCTCAGTGTGAACATTGTCTGAAT74883980CTTTGCTGCTGGTGGTGATATTGTTAGTTGTCAGTTACGTATACACTGG
Xylota segnis genome assembly, chromosome: 2.
OY757237.1:125855352-125855370
GACAGGCGGATTGGTGTGACAGGATGTTGG125855352CTTTGCTGCTGGTGGTGATTGACTGGCTGACGGATGGGGCTTAGGCTGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCACCACCAGCAGCAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCACCACCAGCAGCAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.102 | 1.093 | search_plus_done; http://172.18.8.135:50400/match?q=ATCACCACCAGCAGCAAAG&k=0&no_gap=0&offset=0&limit=50
1.237 | 0.135 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTGCTGCTGGTGGTGAT&k=0&no_gap=0&offset=0&limit=1
1.245 | 0.008 | cgi_end;

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