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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-10 10:14:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 1, clone: LjT11G20, TM0187.
AP009955.1:17733-17755
TTCAGGAACAGGAAGAACAATGTCACCTCT17733ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT
Lotus japonicus genomic DNA, chromosome 2, clone: LjT38O12, TM0324.
AP009072.1:3664-3686
TTCAGGAACAGGAAGAACAATGTCACCTCT3664ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT
Lotus japonicus genomic DNA, chromosome 2, clone: LjB13K21, BM1048.
AP010381.1:79122-79144
TTCAGGAACAGGAAGAACAATGTCACCTCT79122ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:898734-898756
TTCAGGAACAGGAAGAACAATGTCACCTCT898734ATCAGGAGAGATGATAGATAAGCTAGTAATTTTCACTTCAGGATCTAGCGTTT
Lotus japonicus clone JCVI-FLLj-14L3 unknown mRNA.
BT145201.1:416-438
AAACGCTAGATCCTGAAGTGAAAATTACTA416GCTTATCTATCATCTCTCCTGATAGAGGTGACATTGTTCTTCCTGTTCCTGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCAGGAGAGATGATAGATAAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCAGGAGAGATGATAGATAAGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.180 | 0.171 | search_plus_done; http://172.18.8.135:50400/match?q=ATCAGGAGAGATGATAGATAAGC&k=0&no_gap=0&offset=0&limit=50
0.286 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTATCTATCATCTCTCCTGAT&k=0&no_gap=0&offset=0&limit=46
0.287 | 0.001 | cgi_end;

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