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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-25 21:54:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PvEST0027 Bean pod tissue cDNA Entry Library Phaseolus vulgaris cDNA clone BE-65 5' similar to putative lipid transfer protein, mRNA sequence.
EE743311.1:495-514
TGGTGCAAATGGATCTCCAGGTGTAGTTCC495ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
MOOBK38TRB MOO Vigna unguiculata cDNA, mRNA sequence.
FF386491.1:410-429
AACATCTGCTGCTGCAAATGGTGGAGCTCC410ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
MOOBK84TRB MOO Vigna unguiculata cDNA, mRNA sequence.
FF386536.1:315-334
GCGACTCTTTCAAGAATAGCGCTCAGCTCC315ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
MOOBK38TF MOO Vigna unguiculata cDNA 5', mRNA sequence.
FF387182.1:410-429
AACATCTGCTGCTGCAAATGGTGGAGCTCC410ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
MOOBK84TF MOO Vigna unguiculata cDNA 5', mRNA sequence.
FF387225.1:315-334
GCGACTCTTTCAAGAATAGCGCTCAGCTCC315ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
MOOFC09TR MOO Vigna unguiculata cDNA 3', mRNA sequence.
FF395971.1:489-508
AACATCTGCTGCTGCAAATGGTGGAGCTCC489ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTT
UCRVU04_CCNI4053_b1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI4053.b1, mRNA sequence.
FG817286.1:428-447
AACATCTGCTGCTGCAAATGGTGGAGCTCC428ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
UCRVU04_CCNI6364_b1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI6364.b1, mRNA sequence.
FG821199.1:469-488
AACATCTGCTGCTGCAAATGGTGGAGCTCC469ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
UCRVU04_CCNI12764_b1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI12764.b1, mRNA sequence.
FG827977.1:476-495
AACATCTGCTGCTGCAAATGGTGGAGCTCC476ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
UCRVU04_CCNI13519_b1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI13519.b1, mRNA sequence.
FG829287.1:471-490
AACATCTGCTGCTGCAAATGGTGGAGCTCC471ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
UCRVU05_CCNN5057_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN5057.b1, mRNA sequence.
FG842243.1:467-486
AACATCTGCTGCTGCAAATGGTGGAGCTCC467ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU05_CCNN6891_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN6891.b1, mRNA sequence.
FG845380.1:469-488
AACATCTGCTGCTGCAAATGGTGGAGCTCC469ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU05_CCNN19348_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN19348.b1, mRNA sequence.
FG854764.1:469-488
AACATCTGCTGCTGCAAATGGTGGAGCTCC469ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU07_CCNP1537_g1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP1537.g1, mRNA sequence.
FG862790.1:365-384
AACATCTGCTGCTGCAAATGGTGGAGCTCC365ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU07_CCNP5060_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP5060.b1, mRNA sequence.
FG868157.1:472-491
AACATCTGCTGCTGCAAATGGTGGAGCTCC472ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU08_CCNS1200_b1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS1200.b1, mRNA sequence.
FG891909.1:470-489
AACATCTGCTGCTGCAAATGGTGGAGCTCC470ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU08_CCNS15122_b1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS15122.b1, mRNA sequence.
FG897886.1:480-499
AACATCTGCTGCTGCAAATGGTGGAGCTCC480ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU08_CCNS15374_b1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS15374.b1, mRNA sequence.
FG898391.1:457-476
AACATCTGCTGCTGCAAATGGTGGAGCTCC457ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU08_CCNS15944_b1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS15944.b1, mRNA sequence.
FG899505.1:504-523
AACATCTGCTGCTGCAAATGGTGGAGCTCC504ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU08_CCNS4972_b1 Cowpea IT97K-461-4 Mixed Tissue and Conditions cDNA Library UCRVU08-1-2 Vigna unguiculata cDNA clone CCNS4972.b1, mRNA sequence.
FG907141.1:459-478
AACATCTGCTGCTGCAAATGGTGGAGCTCC459ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
UCRVU09_CCNT3556_b1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna unguiculata cDNA clone CCNT3556.b1, mRNA sequence.
FG919509.1:469-488
AACATCTGCTGCTGCAAATGGTGGAGCTCC469ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
UCRVU09_CCNT9035_b1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna unguiculata cDNA clone CCNT9035.b1, mRNA sequence.
FG928762.1:395-414
AACATCTGCTGCTGCAAATGGTGGAGCTCC395ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
UCRVU09_CCNT11728_b1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna unguiculata cDNA clone CCNT11728.b1, mRNA sequence.
FG932134.1:469-488
AACATCTGCTGCTGCAAATGGTGGAGCTCC469ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
UCRVU09_CCNT11759_b1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna unguiculata cDNA clone CCNT11759.b1, mRNA sequence.
FG932191.1:471-490
AACATCTGCTGCTGCAAATGGTGGAGCTCC471ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCAATTTCTGTTG
FCCCVU3005H10.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3005H10 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH619677.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3006E07.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3006E07 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH619730.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3006F07.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3006F07 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH619739.1:490-509
AACATCTGCTGCTGCAAATGGTGGAGCTCC490ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3009F09.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3009F09 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH619910.1:487-506
AACATCTGCTGCTGCAAATGGTGGAGCTCC487ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3010F01.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3010F01 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH619984.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3011B04.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3011B04 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH620033.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3023E06.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3023E06 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH620877.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3031C04.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3031C04 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH621284.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3032H08.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3032H08 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH621394.1:484-503
AACATCTGCTGCTGCAAATGGTGGAGCTCC484ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3035F01.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3035F01 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH621584.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGT
FCCCVU3036A10.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3036A10 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH621623.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTCTGTTGG
FCCCVU3036D04.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3036D04 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH621649.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3038A07.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3038A07 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH621778.1:486-505
AACATCTGCTGCTGCAAATGGTGGAGCTCC486ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
FCCCVU3041A08.b0 Developing seeds (10 days after anthesis) Library Vigna unguiculata cDNA clone FCCCVU3041A08 similar to protease inhibitor/seed storage/lipid transfer protein [A. thaliana], mRNA sequ
GH621862.1:489-508
AACATCTGCTGCTGCAAATGGTGGAGCTCC489ATCATCAACTCCTGGGAACGCAGCATCAGCACGCATCCCATTTTCTGTTG
PVUSE1NG-RP-015_L21_01APR2009_085 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence.
GW886752.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE1NG-RP-016_F15_01APR2009_060 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence.
GW886922.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE1NG-RP-022_F04_15MAY2009_012 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence.
GW888405.1:547-566
TGGTGCAAATGGATCTCCAGGTGTAGTTCC547ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE1NG-RP-1005_L13_23SEPT2008_053 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence.
GW890742.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE1NG-RP-1005_N04_23SEPT2008_004 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence.
GW890770.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAG
PVUSE1NG_RP_1004_M20_22JULY2008_068 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence.
GW892479.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE1NG_RP_1006_E23_26SEP2008_092 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence.
GW892605.1:498-517
TGGTGCAAATGGATCTCCAGGTGTAGTTCC498ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE2NG-RP-023_N07_22JUNE2009_020 PVUSE2NG Phaseolus vulgaris cDNA, mRNA sequence.
GW897741.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE3NG_RP_1002_A09_23JULY2008_047 PVUSE3NG Phaseolus vulgaris cDNA, mRNA sequence.
GW907049.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE4NG_RP_1002_G17_23JULY2008_073 PVUSE4NG Phaseolus vulgaris cDNA, mRNA sequence.
GW912536.1:546-565
TGGTGCAAATGGATCTCCAGGTGTAGTTCC546ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE4NG_RP_1002_M24_23JULY2008_084 PVUSE4NG Phaseolus vulgaris cDNA, mRNA sequence.
GW912655.1:177-196
TGGTGCAAATGGATCTCCAGGTGTAGTTCC177ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT
PVUSE4NG_RP_1003_B10_23JULY2008_047 PVUSE4NG Phaseolus vulgaris cDNA, mRNA sequence.
GW912735.1:521-540
TGGTGCAAATGGATCTCCAGGTGTAGTTCC521ATCATCAACTCCTGGGAACGCAGCCTCAACTCCTGGATCCTTTATTATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCATCAACTCCTGGGAACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCATCAACTCCTGGGAACG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
3.671 | 3.662 | search_plus_done; http://172.18.8.135:50400/match?q=ATCATCAACTCCTGGGAACG&k=0&no_gap=0&offset=0&limit=50
3.906 | 0.235 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTCCCAGGAGTTGATGAT&k=0&no_gap=0&offset=0&limit=0
3.906 | 0.000 | cgi_end;

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