GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 02:40:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lagenorhynchus albirostris genome assembly, chromosome: 1.
OX459072.1:25470866-25470885
TTTCCACCTCTATACCGGTTCCCTCTGATG25470866ATCATCTGTACTCCGACGCCAAGATCAGAACACACTGGCAGAACTAGAAT
Delphinus delphis genome assembly, chromosome: 2.
OX465327.1:25894456-25894475
TTTCCACCTCTATACCGGTTCCCTCTGATG25894456ATCATCTGTACTCCGACGCCAAGATCAGAACACACTGGCAGAACTAGAAT
Stenella coeruleoalba genome assembly, chromosome: 2.
OX596386.1:24997310-24997329
TTTCCACCTCTATACCGGTTCCCTCTGATG24997310ATCATCTGTACTCCGACGCCAAGATCAGAACACACTGGCAGAACTAGAAT
Globicephala melas genome assembly, chromosome: 2.
OY734040.1:125125026-125125045
ATTCTAGTTCTGCCAGTGTGTTCTGATCTT125125026GGCGTCGGAGTACAGATGATCATCAGAGGGAACCGGTATAGAGGTGGAAA
Porphyra yezoensis cDNA, clone:PFL014a09_r, 5'end.
AU191268.1:255-274
TGCCGGACCGTCGCGACGCGACCCGTACGG255GGCGTCGGAGTACAGATGATGACGCGGTCGGCCGGAAGAGCGAGGACGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCATCTGTACTCCGACGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCATCTGTACTCCGACGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=ATCATCTGTACTCCGACGCC&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GGCGTCGGAGTACAGATGAT&k=0&no_gap=0&offset=0&limit=47
0.126 | 0.001 | cgi_end;

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