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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:20:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 15861 from patent US 8030546.
GY468086.1:1-20
1ATCATTGGCTTCAAAGGACTTATATCATATGATGTTGGTGTTTGGGTTTG
Sequence 15861 from patent US 10597667.
MO979239.1:1-20
1ATCATTGGCTTCAAAGGACTTATATCATATGATGTTGGTGTTTGGGTTTG
EST1070635 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT559995.1:1-20
1ATCATTGGCTTCAAAGGACTTATATCATATGATGTTGGTGTTTGGGTTTG
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:118286443-118286462
AAGGAAAAAGAAAGAAGTGTGTAAGATTAT118286443ATCATTGGCTTCAAAGGACTTATATCATATGATGTTGGTGTTTGGGTTTG
Gossypioides kirkii chromosome KI_01.
CP032244.1:4600449-4600468
CAAACTCAAACACCAACATCATATGATATA4600449AGTCCTTTGAAGCCAATGATATAACCTTACACAGTTCTTTCTTTTTTGTT
Gossypium raimondii isolate D5-4 chromosome D5_01.
CP032553.1:5644325-5644344
CAAACCCAAACACCAACATCATATGATATA5644325AGTCCTTTGAAGCCAATGATATAAACTTGCGCACTTCTTTCTTTTTCCTT
Gossypium herbaceum isolate GPA1alz chromosome 1.
CP106699.1:7361606-7361625
CAAACCCAAACACCAACATCATATGATATA7361606AGTCCTTTGAAGCCAATGATATAATCTTACACACTTCTTTCTTTTTCCTT
Gossypium bickii isolate GPG1lz chromosome 1.
CP106715.1:7564679-7564698
CAAACCCAAACACCAACATCATATGATATA7564679AGTCCTTTGAAGCCAATGATATAAACTTACGCACTTCTTTCTTTTTCCTT
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:292934310-292934329
CACTCCCCAAAAGGAAAGAAAAACATATTC292934310AGTCCTTTGAAGCCAATGATTACTTTAATAACATTACAAAGGCAGGATGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCATTGGCTTCAAAGGACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCATTGGCTTCAAAGGACT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.374 | 0.365 | search_plus_done; http://172.18.8.135:50400/match?q=ATCATTGGCTTCAAAGGACT&k=0&no_gap=0&offset=0&limit=50
0.463 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=AGTCCTTTGAAGCCAATGAT&k=0&no_gap=0&offset=0&limit=46
0.466 | 0.004 | cgi_end;

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