GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-01-10 18:03:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sparus aurata genome assembly, chromosome: 4.
LR537124.1:3182860-3182877
TCCACTCTTGATGCTGAGCTTACTGATGCT3182860ATCATTTGGCATGCAGCCAAGAAAATGGTGTCAATCAACTTATTATCT
Zeus faber genome assembly, chromosome: 19.
OY482863.1:4344049-4344066
CAAACAGCGCTGCCGCAGCTGCAGAACTGC4344049ATCATTTGGCATGCAGCCGGTGTGCTGCTGAGGGTGGAGGACAGAGAT
Anaerovoracaceae bacterium isolate fe68b2db-f37a-4e12-b54c-8327b9d680bb genome assembly, chromosome: 11.
OY761155.1:26326-26343
CGAAAGGGCCGGAGTTAACCTTCTGAATAT26326ATCATTTGGCATGCAGCCTCCTGTGCAACCTGTTCCGGACGGTTTTAT
Anaerovoracaceae bacterium isolate 4d0eff97-7de3-49ad-953d-66426f0db4f8 genome assembly, chromosome: 1.
OY782829.1:1310713-1310730
CGAAAGGGCCGGAGTTAACCTTCTGAATAT1310713ATCATTTGGCATGCAGCCTCCTGTGCAACCTGTTCCGGACGGTTTTAT
TSA: Chromera velia contig17902.ChveCCMP2878 mRNA sequence.
JO787523.1:805-822
AATGAATGGCTTTGCGAAGGAGACGCCTCT805ATCATTTGGCATGCAGCCAAAGAGCTTGGAGAAAGACTAGGAGAAAGA
PP_LBa0030-C17.F PP_LBa Prunus persica genomic 5', genomic survey sequence.
FI977902.1:28-45
TGCGCTAGAGGAGTTCATTTAGGAAGT28ATCATTTGGCATGCAGCCCGGCCTTACTAGGCCGGCCCAAGGCCCGAC
Musa acuminata subsp. malaccensis isolate AA chromosome 4.
CP126373.1:1495422-1495439
ACTCATCTCACCAACCCATGTCACCATCAC1495422ATCATTTGGCATGCAGCCATTTTATGTTAAAACTAGAGCTTAACATTC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A04.
HG996469.1:1457269-1457286
ACTCATCTCACCAACCCATGTCACCATCAC1457269ATCATTTGGCATGCAGCCATTTTATGTTAAAACTAGAGCTTAACATTC
Triticum aestivum genome assembly, chromosome: 3A.
LR862514.1:354121741-354121758
ATCTAAGTCCTAGAAGATCTCACCCACATC354121741ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR862518.1:54558243-54558260
ATCTGAGTCATAGAAGATCTCACCCACATT54558243ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR862535.1:348774110-348774127
ATCTAAGTCCTAGAAGATCTCACCCACATC348774110ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR862539.1:52968695-52968712
ATCTGAGTCATAGAAGATCTCACCCACATT52968695ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR862556.1:351696603-351696620
ATCTAAGTCCTAGAAGATCTCACCCACATC351696603ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR862560.1:53708104-53708121
ATCTGAGTCATAGAAGATCTCACCCACATT53708104ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR865464.1:343443211-343443228
ATCTAAGTCCTAGAAGATCTCACCCACATC343443211ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR865468.1:53107025-53107042
ATCTGAGTCATAGAAGATCTCACCCACATT53107025ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR865485.1:344583973-344583990
ATCTAAGTCCTAGAAGATCTCACCCACATC344583973ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR865489.1:52462096-52462113
ATCTGAGTCATAGAAGATCTCACCCACATT52462096ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR865506.1:356587554-356587571
ATCTAAGTCCTAGAAGATCTCACCCACATC356587554ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR865510.1:53173600-53173617
ATCTGAGTCATAGAAGATCTCACCCACATT53173600ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR865745.1:357411393-357411410
ATCTAAGTCCTAGAAGATCTCACCCACATC357411393ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR865749.1:53259451-53259468
ATCTGAGTCATAGAAGATCTCACCCACATT53259451ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR865766.1:350806463-350806480
ATCTAAGTCCTAGAAGATCTCACCCACATC350806463ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR865770.1:52807235-52807252
ATCTGAGTCATAGAAGATCTCACCCACATT52807235ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR877315.1:352751766-352751783
ATCTAAGTCCTAGAAGATCTCACCCACATC352751766ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR877319.1:54802767-54802784
ATCTGAGTCATAGAAGATCTCACCCACATT54802767ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LR878441.1:357277605-357277622
ATCTAAGTCCTAGAAGATCTCACCCACATC357277605ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LR878445.1:53607324-53607341
ATCTGAGTCATAGAAGATCTCACCCACATT53607324ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
LS992086.1:343801519-343801536
ATCTAAGTCCTAGAAGATCTCACCCACATC343801519ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
LS992090.1:53117686-53117703
ATCTGAGTCATAGAAGATCTCACCCACATT53117686ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum turgidum subsp. durum genome assembly, chromosome: 3A.
LT934115.1:347763392-347763409
ATCTAAGTCCTAGAAGATCTCACCCACATC347763392ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum turgidum subsp. durum genome assembly, chromosome: 4B.
LT934118.1:51709823-51709840
ATCTGAGTCATAGAAGATCTCACCCACATT51709823ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
OU015727.1:352770122-352770139
ATCTAAGTCCTAGAAGATCTCACCCACATC352770122ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
OU015731.1:56191423-56191440
ATCTGAGTCATAGAAGATCTCACCCACATT56191423ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
OU343171.1:355673997-355674014
ATCTAAGTCCTAGAAGATCTCACCCACATC355673997ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
OU343179.1:56079908-56079925
ATCTGAGTCATAGAAGATCTCACCCACATT56079908ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
OU963878.1:355102698-355102715
ATCTAAGTCCTAGAAGATCTCACCCACATC355102698ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
OV100743.1:351501908-351501925
ATCTAAGTCCTAGAAGATCTCACCCACATC351501908ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
OV100747.1:54180469-54180486
ATCTGAGTCATAGAAGATCTCACCCACATT54180469ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 3A.
OW530316.1:351501908-351501925
ATCTAAGTCCTAGAAGATCTCACCCACATC351501908ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
OW530320.1:54180469-54180486
ATCTGAGTCATAGAAGATCTCACCCACATT54180469ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Mercurialis annua genome assembly, chromosome: LG2.
OW569313.1:53590893-53590910
TGATAACCTTTCAATCCCCTTTTATCAAGA53590893ATCATTTGGCATGCAGCCTTGTCATCATTGCTGCACAAAAGTGATTAC
Triticum aestivum genome assembly, chromosome: 3A.
OX637231.1:287920965-287920982
ATCTAAGTCCTAGAAGATCTCACCCACATC287920965ATCATTTGGCATGCAGCCGCCTTGATAGACAATGTGCGCAGAAGGAGT
Triticum aestivum genome assembly, chromosome: 4B.
OX637235.1:43314073-43314090
ATCTGAGTCATAGAAGATCTCACCCACATT43314073ATCATTTGGCATGCAGCCGCCTTGATAGAAAACGTGCGCAGAAGGAGT
Steromphala cineraria genome assembly, chromosome: 6.
OU744725.1:10544140-10544157
TATTAAAGCCGACCCCTCGCCCGTGATGGG10544140ATCATTTGGCATGCAGCCAATGGGAATGCCTATGGGAGGAATGACGGG
Acleris literana genome assembly, chromosome: 9.
OX335677.1:2202271-2202288
CATTTGGCATAATCATCATTTGGCATACTC2202271ATCATTTGGCATGCAGCCTTTTTTTCTGAAACCGTATAGTTTTCAGGA
Conomelus anceps genome assembly, chromosome: 2.
OX418217.1:104403089-104403106
TTTCAACAATGCCTAAACTGCTGATTCAGC104403089ATCATTTGGCATGCAGCCCAATATAATCCGCTGGCTCTGTACAAATCT
Beris chalybata genome assembly, chromosome: 4.
OX421897.1:20989707-20989724
CGAAGAAAAATGCAGAAAATTAACGGCCGA20989707ATCATTTGGCATGCAGCCTCTCTACATTCAATATTTGAATGTCCTTTT
Chymomyza fuscimana genome assembly, chromosome: 2.
OX465089.1:7117507-7117524
TGTTGTACAATTTATTGTATAAAGCAGAAA7117507ATCATTTGGCATGCAGCCAGCTATCATATTCATACATACATACGTACG
Beris morrisii genome assembly, chromosome: 4.
OX638313.1:28359625-28359642
CGAAGAAAAATGCAGAAAATTAACGGCCGA28359625ATCATTTGGCATGCAGCCTCTCTACATTCAATATTTGAATGTCCTTTT
Eristalinus aeneus genome assembly, chromosome: 1.
OY019130.1:78036024-78036041
TCTTCTTCAAAACTCCACAACGAGAAATAA78036024ATCATTTGGCATGCAGCCATGCACAACCCAGCAGACAGCTCACACACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCATTTGGCATGCAGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCATTTGGCATGCAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.211 | 1.202 | search_plus_done; http://172.18.8.135:50400/match?q=ATCATTTGGCATGCAGCC&k=0&no_gap=0&offset=0&limit=50
1.319 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTGCATGCCAAATGAT&k=0&no_gap=0&offset=0&limit=0
1.319 | 0.000 | cgi_end;

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