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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:59:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Heterocephalus glaber genome assembly, chromosome: 14.
OX090954.1:36799597-36799616
GCCTGCCTGTTGAATACATCAAAGTAACTT36799597ATCCAAACCACAAACTCAACATTTCATAAATCTGACTCATTTTCTCCACA
Apteryx australis mantelli genome assembly, scaffold: scaffold523.
LK065370.1:1563641-1563660
TTCCATATCACTAGGCACCTTCACAGAGAA1563641ATCCAAACCACAAACTCAACTAGACCCATGAAAATGATATGTTCTTCCTT
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:11552865-11552884
TGAGTGGGAACAGAAATAGAGGATTCTCTC11552865ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACAACATCA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:11617534-11617553
TGAGTGGGAGCAGAAATAGAGGATTCTCTC11617534ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACAACATCA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:12039123-12039142
TGAGTGGGAGCAGAAATAGAGGATTCTCTC12039123ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACATCATCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:11454575-11454594
TGAGTGGGAGAAGAAATAGAGGATTCTCTC11454575ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACAGCATCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:11537130-11537149
TGAGTGGGAGCAGAAATAGAGGATTCTCTC11537130ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACAGCATCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:11635521-11635540
TGAGTGGGAGCAGAAATAGAGGATTCTCTC11635521ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACAACATCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:12271458-12271477
TGAGTGGGAGCAGAAATAGAGGATTCTCTC12271458ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACATCATCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:12443999-12444018
TGAGTGGGAGCAGAAATAGAGGATTCTCTC12443999ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACAACATCA
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:11815824-11815843
TGAGTGGGAGCAGAAATAGAGGATTCTCTC11815824ATCCAAACCACAAACTCAACCTTCTTGGACATGTGAGTGTGACATCATCA
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:9371813-9371832
TGAGTGGGAGCAAAAATAGAGGATTCTCTC9371813ATCCAAACCACAAACTCAACCTTCGTGGACATGCGAGTGTGACAACGTCA
Darwinula stevensoni.
LR900054.1:83034-83053
CCTTAGCTCCAATGTACTTTTTAAATAAAA83034ATCCAAACCACAAACTCAACTTACCTGGCATAACTCTCTATCACTTGTCT
Pyrausta purpuralis genome assembly, chromosome: 21.
OZ001663.1:23534582-23534601
TTTTTTTTTAAAAGTTAACCACGCTTTAAA23534582ATCCAAACCACAAACTCAACTTATAAAGATAAAATCTAAATATTTTTTTC
Heterocephalus glaber genome assembly, chromosome: 14.
OX090922.1:61524923-61524942
TGTGGAGAAAATGAGTCAGATTTATGAAAT61524923GTTGAGTTTGTGGTTTGGATAAGTTACTTTGATGTATTCAACAGGCAGGC
Heterocephalus glaber genome assembly, chromosome: 21.
OZ001086.1:61531923-61531942
TGTGGAGAAAATGAGTCAGATTTATGAAAT61531923GTTGAGTTTGTGGTTTGGATAAGTTACTTTGATGTATTCAACAGGCAGGC
Heterocephalus glaber genome assembly, chromosome: 21.
OZ001129.1:61445385-61445404
TGTGGAGAAAATGAGTCAGATTTATGAAAT61445385GTTGAGTTTGTGGTTTGGATAAGTTACTTTGATGTATTCAACAGGCAGGC
Sarcophilus harrisii genome assembly, chromosome: 2.
LR735555.1:253305949-253305968
TTAGATAGACTTTTTAGGTAGTAAGCAAAG253305949GTTGAGTTTGTGGTTTGGATGTGATATAGAGGTTGCAGAGCAGAACAGAT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:32101754-32101773
TGATGCTGTCACACTCACATGTCCAAGAAG32101754GTTGAGTTTGTGGTTTGGATGAGAGAATCCTCTATTTCTGCTCCCACTCA
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:34680973-34680992
TGATGCTGTCACACTCACATGTCCAAGAAG34680973GTTGAGTTTGTGGTTTGGATGAGAGAATCCTCTATTTCTGTTCCCACTCA
Malus domestica genome assembly, chromosome: 5.
OU696681.1:34173456-34173475
TGATGATGTCACACTCACATGTCCAAGAAG34173456GTTGAGTTTGTGGTTTGGATGAGAGAATCCTCTATTTCTGCTCCCACTCA
Malus domestica genome assembly, chromosome: 5.
OU744546.1:33804665-33804684
TGATGCTGTCACACTCACATGTCCAAGAAG33804665GTTGAGTTTGTGGTTTGGATGAGAGAATCCTCTATTTCTGTTCCCACTCA
Malus domestica genome assembly, chromosome: 5.
OU744957.1:34259400-34259419
TGATGATGTCACACTCACATGTCCAAGAAG34259400GTTGAGTTTGTGGTTTGGATGAGAGAATCCTCTATTTCTGCTCCCACTCA
Malus domestica genome assembly, chromosome: 5.
OU744995.1:35218925-35218944
TGATGATGTCACACTCACATGTCCAAGAAG35218925GTTGAGTTTGTGGTTTGGATGAGAGAATCCTCTATTTCTGCTCCCACTCA
Trifolium dubium genome assembly, chromosome: 9.
OX638070.1:13204470-13204489
GAATACATTTTGGGATTTAGGAATTTTGGA13204470GTTGAGTTTGTGGTTTGGATTTAGGAATTGAAAAGGGTTTGGTGATTAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCCAAACCACAAACTCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCAAACCACAAACTCAAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.211 | 0.202 | search_plus_done; http://172.18.8.135:50400/match?q=ATCCAAACCACAAACTCAAC&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGAGTTTGTGGTTTGGAT&k=0&no_gap=0&offset=0&limit=36
0.312 | 0.007 | cgi_end;

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