GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:27:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 6984 from patent US 10006042.
MI851711.1:710-733
GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
Sequence 6984 from patent US 10337023.
MO174878.1:710-733
GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
Sequence 6984 from patent US 10774340.
MV708625.1:710-733
GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
Sequence 6984 from patent US 11499161.
OO876406.1:710-733
GGGAAGGAGCTGGAGTTCTACATGAAAAAG710ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
EG-A11_013_E08 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600608.1:8-31
GAAAAAG8ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
OPR03790 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A3210.seq, mRNA sequence.
EL693732.1:230-253
GGGAAGGAGCTGGAGTTCTACATGAAAAAG230ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
OPR04953 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_B2162.seq, mRNA sequence.
EL694887.1:219-242
GGGAAGGAGCTGGAGTTCTACATGAAAAAG219ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
pOP-EO03909_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03909 5', mRNA sequence.
EY409983.1:170-193
GGGAAGGAGCTGGAGTTCTACATGAAAAAG170ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
Elaeis guineensis EST, clone (6lib)_isotig21409.
LM626311.1:723-746
GGGAAGGAGCTGGAGTTCTACATGAAAAAG723ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
TSA: Elaeis guineensis EgEfMPOB00194 40S ribosomal protein S8 mRNA, complete cds, mRNA sequence.
EU285008.1:634-657
GGGAAGGAGCTGGAGTTCTACATGAAAAAG634ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGA
Microcos paniculata chromosome 8b.
CP131454.1:19855105-19855128
GGTAAAGAGTTGGAGTTCTATACGAGGAAA19855105ATCCAAAGGAAGAAGGGCAAGGGTGCTGGAGCTGCTTAGATGTGCAGTATTTGA
Microcos paniculata chromosome 8a.
CP131463.1:19373976-19373999
GGTAAAGAGTTGGAGTTCTATACGAGGAAA19373976ATCCAAAGGAAGAAGGGCAAGGGTGCTGGAGCTGCTTAGATGTGCAGTATTTGA
Elaeis guineensis 40S ribosomal protein S8 (RPS8) mRNA, partial cds.
KC146059.1:481-504
GGGAAGGAGCTGGAGTTCTACATGAAAAAG481ATCCAAAGGAAGAAGGGCAAGGGTGGTGCCGGAGCTGCTTGAGTGGACTTTTGT
TSA: Elaeis guineensis isotig09297.Elguifruit mRNA sequence.
JO096524.1:240-263
ACAAAAGTCCACTCAAGCAGCTCCGGCACC240ACCCTTGCCCTTCTTCCTTTGGATCTTTTTCATGTAGAACTCCAGCTCCTTCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATCCAAAGGAAGAAGGGCAAGGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCAAAGGAAGAAGGGCAAGGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.757 | 0.748 | search_plus_done; http://172.18.8.135:50400/match?q=ATCCAAAGGAAGAAGGGCAAGGGT&k=0&no_gap=0&offset=0&limit=50
0.794 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCTTGCCCTTCTTCCTTTGGAT&k=0&no_gap=0&offset=0&limit=37
0.795 | 0.001 | cgi_end;

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