GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 23:51:09, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Muscardinus avellanarius genome assembly, chromosome: 17.
OY726574.1:4777663-4777682
TTTAAAAAGCATCAGTCTGTATTAATAGAT4777663ATCCAACCCAATCCAAATCATTGCATTCTTCATCATACTGTGAAAAATAA
Plecotus auritus genome assembly, chromosome: 8.
OY734029.1:81654787-81654806
AGCCTTCGTGGTTTGAAGTCGAAACACCCA81654787ATCCAACCCAATCCAAATCAGCCCACCCACACCCAACTGAAGACATGTGA
Marchantia polymorpha subsp. ruderalis Tak-1 DNA, chromosome: 5.
AP019870.1:21794174-21794193
TAGCATCATCTGATCATCAAGGCCAATCCA21794174ATCCAACCCAATCCAAATCACCCAATCCCAGAGGCGATCGCAGCCAGAAG
Marchantia polymorpha subsp. ruderalis Takaragaike-1 DNA, chromosome: 5, sequence.
AP031346.1:25798783-25798802
TAGCATCATCTGATCATCAAGGCCAATCCA25798783ATCCAACCCAATCCAAATCACCCAATCCCAGAGGCGATCGCAGCCAGAAG
Marchantia polymorpha subsp. ruderalis Takaragaike-2 DNA, chromosome: 5, sequence.
AP031355.1:25491972-25491991
TAGCATCATCTGATCATCAAGGCCAATCCA25491972ATCCAACCCAATCCAAATCACCCAATCCCAGAGGCGATCGCAGCCAGAAG
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:10447182-10447201
TATGGTTGGATAATGGATTTTATTTTTTCA10447182ATCCAACCCAATCCAAATCATATTATTAAATTTATTATTATATATAAATT
Lycium barbarum cultivar Ningqi No.1 chromosome 04.
CP145789.1:141375341-141375360
AACTAATAAGTGATTTTAGAGTCAACGGAC141375341ATCCAACCCAATCCAAATCACACCATCCGTACAACTGGAGATCACAATCT
Vitis retordii isolate mmpt chromosome 19.
CP149605.2:27682866-27682885
AGTAACTTAGGAATTTACACAGTGATAATA27682866ATCCAACCCAATCCAAATCATACATACTTTCCACCAACTTTCTACGAATT
Glycine soja cultivar YSD56 chromosome 8.
CP154574.1:10392937-10392956
TATGGTTGGATAATGGATTTTATTTTTTCA10392937ATCCAACCCAATCCAAATCATATTATTAAATTTATTATTATATATAAATT
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome B03.
CP163470.1:40744419-40744438
ATCCATTCAAAGATCTTCTCGTAAGAGGGC40744419ATCCAACCCAATCCAAATCACACCAACCTGTAAGATGAAAATCACATTCA
Avena insularis genome assembly, chromosome: 6D.
OU342350.1:54597410-54597429
TCTGCAAGACAAATATACCCATGACTGCAG54597410ATCCAACCCAATCCAAATCAATTGCCCCTTTATCCCCTGAATAGAACAAG
Avena sativa genome assembly, chromosome: 2D.
OU342393.1:53776288-53776307
TGTGCAAGACAAATATACCCATGACTGCAG53776288ATCCAACCCAATCCAAATCAATTGCCCCTTTATCCCCTGAGTAGAACAAG
Avena longiglumis genome assembly, chromosome: 6A.
OU342752.1:16723493-16723512
TCTGCAAGACAAATATACCCATGACTGCAG16723493ATCCAACCCAATCCAAATCAATTGCCCCTTTATCCCCTTAGTAGAACAAA
Avena sativa genome assembly, chromosome: 16.
OV702294.1:56568990-56569009
TGTGCAAGACAAATATACCCATGACTGCAG56568990ATCCAACCCAATCCAAATCAATTGCCCCTTTATCCCCTGAGTAGAACAAG
Cornus suecica genome assembly, chromosome: 11.
OY998248.1:31481244-31481263
TGGAACCAAAATAAAACAACACCAAATCAA31481244ATCCAACCCAATCCAAATCAAAACCAAAAACTAACACCGCACCGCACCGT
Brassica nigra genome assembly, chromosome: 2.
OZ173172.1:15788930-15788949
GTGTTAAAATGGATAAAAATTAATGGATCA15788930ATCCAACCCAATCCAAATCATAGATTTTAATGGATAGAAAATTGGGTAAA
Cybosia mesomella genome assembly, chromosome: Z.
OX276388.1:35595857-35595876
TTCATTTTGACTACCACGGTAGCGGATGCC35595857ATCCAACCCAATCCAAATCAGAGCCGCGTCCGTTGATTAGCAGGTGTACA
Geotrupes spiniger genome assembly, chromosome: X.
OY390741.1:19102715-19102734
ACCCAACCCAACTCAACCCAACCCAACCCA19102715ATCCAACCCAATCCAAATCACTCGTGCGACAATATCTTGCTTTACTAAAC
Aporrectodea icterica genome assembly, chromosome: 2.
OY744603.1:69426251-69426270
ACATAATCCTATTCAACCCAACTCAACTCA69426251ATCCAACCCAATCCAAATCAAGTCAAGCCACCCGACACAACTCAGCACAA
Sepioteuthis lessoniana genome assembly, chromosome: 6.
OY757909.1:60494617-60494636
AATCAAACCAATCCAAACCAAATCAAACCA60494617ATCCAACCCAATCCAAATCAAACCAATCCAATCCAAATCAAAACAATCCA
Callogorgia gracilis genome assembly, chromosome: 9.
OZ123365.1:3160338-3160357
AATCGATCCAATGCAATGCAATTCAAATAA3160338ATCCAACCCAATCCAAATCAATCCAATCCAATTCAAACCAATCCAATTCA
Callogorgia gracilis genome assembly, chromosome: 9.
OZ123365.1:3191786-3191805
AATCGATCCAATGCAATGCAATTCAAATCA3191786ATCCAACCCAATCCAAATCAATCCAATCCAATTCAAACCAATCCAATTCA
Callogorgia gracilis genome assembly, chromosome: 9.
OZ123365.1:3201157-3201176
AATCGATCCAATGCAATGCAATTCAAATCA3201157ATCCAACCCAATCCAAATCAATCCAATCCAATTCAAACCAATCCAATTCA
Turbinaria reniformis genome assembly, chromosome: 6.
OZ123459.1:15095465-15095484
AATAAAACTACACAAACAGAACCTTCCACT15095465ATCCAACCCAATCCAAATCAATCCAACTTCACACAAGAGCCTTAATCCGG
Turbinaria reniformis genome assembly, chromosome: 12.
OZ123465.1:38550726-38550745
AATAAAACTATACAAACAGAACCTTCCACT38550726ATCCAACCCAATCCAAATCAATCCAACTTCACTCAAGAGCCTTAACCCGG
Rheumaptera undulata genome assembly, chromosome: Z.
OZ174065.1:32067172-32067191
GAGGAACCGTCTGATGAAGTCCACGCTACG32067172ATCCAACCCAATCCAAATCATGACGGGCACCGAAAAGTTTCAGCAGCTTC
Rheumaptera hastata genome assembly, chromosome: 14.
OZ187326.1:3217169-3217188
CATACTGATCCCGCTGTCATCGTGATTAAT3217169ATCCAACCCAATCCAAATCAATGCGGCACCGAGAAGTTTCAGCAGCTTCT
Rhinatrema bivittatum genome assembly, chromosome: 12.
LR584398.1:54524270-54524289
GACACATAGAATCAGCAAAGACTCGCAGGC54524270ATCCAACCCAATCCAAATCACCAAGATCTCACCAACAGCCGCGCTCATGC
Danio aesculapii genome assembly, chromosome: 25.
LR812502.1:4415931-4415950
ATCCAGACCAAACCAGACCAGACCAGATCA4415931ATCCAACCCAATCCAAATCATCCAATCCAGACCAAACCAGACCAGACCAG
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:21526673-21526692
CAATTCAATGCAATCCAATCCAAGTAACGC21526673ATCCAACCCAATCCAAATCAATCCCAGTAACTGCACCCAATCCAATCCAA
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:21537283-21537302
CAATTCAATGCAATCCAATCCAAGTAACGC21537283ATCCAACCCAATCCAAATCAATCCCAGTAACTGCACCCAATCCAATCCAA
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:21740930-21740949
CAATTCAATGCAATCCAATCCAAGTAACGC21740930ATCCAACCCAATCCAAATCAATCCCAGTAACTGCACCCAATCCAATCCAA
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:21749763-21749782
CAATTCAATGCAATCCAATCCAAGTAACGC21749763ATCCAACCCAATCCAAATCAATCCCAGTAACTGCACCCAATCCAATCCAA
Lissotriton helveticus genome assembly, chromosome: 10.
OZ180056.1:1196302206-1196302225
AGTCCCAGGAACAATCCAAATCCCAATTCA1196302206ATCCAACCCAATCCAAATCAGTCCCAATCCCAATCCCAATCCAAATCCAA
Sarcophilus harrisii genome assembly, chromosome: 3.
LR735556.1:296517587-296517606
CTATAAATATTCAGTAAGTGTTTATTGGGT296517587TGATTTGGATTGGGTTGGATTTGGATCAGGACTAAAATGTAAAGGTGAGT
TSA: Sedum alfredii, clone Sa_Contig06881.
HE723986.1:208-227
GTTGATGTGGTCTGAAGGGGGTCCTTTGTT208TGATTTGGATTGGGTTGGATTGTGGTGGAGGGTATAATTGGTGGCTTGAG
Malpighia emarginata NRA309 DNA, chromosome 4, nearly complete sequence.
AP035805.1:1140830-1140849
ACCAACCGATCCAATCTGATTTATTTAGGT1140830TGATTTGGATTGGGTTGGATCGACTCGTCAGATGAACTCGACCAAAATTG
Gossypioides kirkii chromosome KI_08.
CP032250.1:759510-759529
TTGTGGGCTCTTTGTAATTGGGTTTTAGGT759510TGATTTGGATTGGGTTGGATTATTGGATTGTAATGGGTAAAAGGGCATTT
Gossypioides kirkii chromosome KI_08.
CP032250.1:764391-764410
TTGTGGGCTCTTTGTAATTGGGTTTTAGGT764391TGATTTGGATTGGGTTGGATAATTGGAGTATAAAAGAATAAATGATCACT
Gossypioides kirkii chromosome KI_08.
CP032250.1:775495-775514
TTGTGGGCTCTTTGTAATTGGGTTTTAGGT775495TGATTTGGATTGGGTTGGATAATTGGAGTATAAAAGAATAAATGATCACT
Gossypioides kirkii chromosome KI_08.
CP032250.1:777976-777995
TTGTGGGCTCTTTGTAATTGGGTTTTAGGT777976TGATTTGGATTGGGTTGGATAATTGGAGTATAAAAGAATAAATGATCACT
Gossypioides kirkii chromosome KI_08.
CP032250.1:789086-789105
TTGTGGGCTCTTTGTAATTGGGTTTTAGGT789086TGATTTGGATTGGGTTGGATAATTGGAGTATAAAAGAATAAATGATCACT
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 6.
CP125978.1:19528013-19528032
CTTGTTCTACTCAGGGGATAAAGGAGCAAT19528013TGATTTGGATTGGGTTGGATCTGCAGTCATGGGTATATCTGTCTTGCAGA
Vitis x doaniana cultivar PI 588149 chromosome 19.
CP128327.1:1247066-1247085
AAGTTAGTGGAAAATTATGGAAAGTATATA1247066TGATTTGGATTGGGTTGGATTTATAATCAGCCCGAGCTCAATCTATATAT
Alnus glutinosa genome assembly, chromosome: 1.
OY340898.1:49895485-49895504
GGAATATGATTTGGATTTGGTTGAACTAGT49895485TGATTTGGATTGGGTTGGATGGTAGTATTAGAATTAGATTGTAGTGCCTT
Alisma plantago-aquatica genome assembly, chromosome: 2.
OY856410.1:30713134-30713153
CCGAACAAACACCTGGAAGTCCCGAGCCTT30713134TGATTTGGATTGGGTTGGATGGGTTAGGTGCCTATTGATGGCGCCATTGA
Geranium rotundifolium genome assembly, chromosome: 1.
OY987311.1:28888579-28888598
TTTTGTTTGTGATAAGAATGTGTATAAGAG28888579TGATTTGGATTGGGTTGGATCAAATGATAATGTGTATTTATAGAGAAAAA
Cornus suecica genome assembly, chromosome: 9.
OY998246.1:2528545-2528564
ACGGTGCGGTGCGGTGTTAGTTTTTTATTT2528545TGATTTGGATTGGGTTGGATTTGGTTTGGTGTAGATGGTTTTGGTGTGAG
Pisum sativum genome assembly, chromosome: 2.
OZ075429.1:461726143-461726162
AAATCCAAAATAAACCAACCCGCTCATCAA461726143TGATTTGGATTGGGTTGGATTTACGGATCATCCACTAAATATAATTTAAT
Pisum sativum genome assembly, chromosome: 2.
OZ173751.1:463185694-463185713
AAATTCAAAATAAACCAACTCGCTCATCAA463185694TGATTTGGATTGGGTTGGATTTACGGATCATCTACTAAATATAATTTTAA
Vitis vinifera genome assembly, chromosome: 19.
OZ210975.1:1105917-1105936
AATTTAGTGGAAAATTATGGAAAGTATAAA1105917TGATTTGGATTGGGTTGGATTTATAATCAGCCCAAGCTCAATCTATACAT
Vitis pseudoreticulata genome assembly, chromosome: 19.
OZ211438.1:1138021-1138040
AAGTTAGAGGAAAATTATGGAAAGTATATA1138021TGATTTGGATTGGGTTGGATTTATAATCAGCCCGAGCTCAATCTATATAT
Vitis pseudoreticulata genome assembly, chromosome: 19.
OZ211516.1:1148948-1148967
AAGTTAGCGGAAAATTATGGAAAGTATATA1148948TGATTTGGATTGGGTTGGATTTATAATCAGCCCGAGCTCAATCTATATAT
Vitis cinerea var. helleri x Vitis vinifera genome assembly, chromosome: 19.
OZ211554.1:1049774-1049793
ATGTTAGTGGAAAATTATGGAAAGTATATA1049774TGATTTGGATTGGGTTGGATTTATAATCAGCCCGAGCTCAATCTATATAT
Vitis cinerea var. helleri x Vitis riparia genome assembly, chromosome: 19.
OZ211591.1:1131171-1131190
AAGTTAGCGGAAAATTATGGAAAGTATATA1131171TGATTTGGATTGGGTTGGATTTATAATCAGCCCGAGCTCAATCCATACAT
Vitis cinerea var. helleri x Vitis riparia genome assembly, chromosome: 19.
OZ211611.1:1296542-1296561
AAGTTAGCGGAAAATTATGGAAAGTATATA1296542TGATTTGGATTGGGTTGGATTTATAATCAGCCCGAGCTCAATCCATACAT
Vitis cinerea var. helleri x Vitis riparia genome assembly, chromosome: 19.
OZ211662.1:1308319-1308338
AAGTTAGTGGAAAATTATGGAAAGTATATA1308319TGATTTGGATTGGGTTGGATTTATAGTCAGCCCGAGCTCAATCCATACAT
Vespa crabro genome assembly, chromosome: 5.
OU342404.1:10491231-10491250
AAGGATGGCGACTGATTCAGGGAATGGGGT10491231TGATTTGGATTGGGTTGGATTGGCGGAGGAGTTGGTTGGTTGGTTTGTTT
Glyphotaelius pellucidus genome assembly, chromosome: 23.
OW386560.1:3204442-3204461
CTGTGAAACGACTGGCCCTTAGAAACATGA3204442TGATTTGGATTGGGTTGGATGCTATGTGTCTTTTTTGAATTGCAGAAGTT
Sabethes cyaneus genome assembly, chromosome: 2.
OX030888.1:187607456-187607475
TTTGGATTGGATTTGGATTGGATTTGGATT187607456TGATTTGGATTGGGTTGGATTGGGATTGGATTTGAACTGGATTTGGGTTG
Luidia sarsii genome assembly, chromosome: 17.
OX465117.1:418746-418765
GGGCATGGGTTAGGTTGGGTTGGGTTGGAT418746TGATTTGGATTGGGTTGGATTGGCATGGGTTAGGTTGGGTTGGGTTGGGT
Luidia sarsii genome assembly, chromosome: 17.
OX465117.1:418796-418815
TGGCATGGGTTAGGTTGGGTTGGGTTGGGT418796TGATTTGGATTGGGTTGGATTGGCATGGGTTAGGTTGGGTTAGGTTAGGT
Luidia sarsii genome assembly, chromosome: 17.
OX465117.1:418926-418945
TAGGTTGGGATAGGTTGGGTAGGGATGGGT418926TGATTTGGATTGGGTTGGATTGGGTTGGATTAGAATGGGTTAGGTTGGGT
Luidia sarsii genome assembly, chromosome: 17.
OX465117.1:419086-419105
GTGCATGGGTTAGGTTGGGTTGGGCTGGGT419086TGATTTGGATTGGGTTGGATGGGCATGGGTTAGGTTGGGTTGGGCTGGGT
Geotrupes spiniger genome assembly, chromosome: 5.
OY390735.1:5174559-5174578
TGGGTTGGGTTGGATTGATTTGGGTTGAAT5174559TGATTTGGATTGGGTTGGATTGTTTTGGTTTGGATTGGTTTGGGTTAGAT
Stomoxys calcitrans genome assembly, chromosome: 1.
OY720435.1:11030766-11030785
AAAATGGCCTATGTGTTATTTGATTTCATT11030766TGATTTGGATTGGGTTGGATTGGATTGGATGAATTGGATTGGATTGGATT
Meiosimyza platycephala genome assembly, chromosome: 4.
OY759211.1:30636605-30636624
TGGATTGGATTGGATTGGATTGGATTGGAT30636605TGATTTGGATTGGGTTGGATTGGATTGGATTGGATTGGATTGGATTGGAT
Callogorgia gracilis genome assembly, chromosome: 9.
OZ123365.1:9286247-9286266
TGGATTGGATTGATTTGAATTGGATTGGAT9286247TGATTTGGATTGGGTTGGATTCGTTTGAATTGGGTTGGATTGATTTGAAT
Callogorgia gracilis genome assembly, chromosome: 9.
OZ123365.1:9406914-9406933
TGATTTGAATTGGATTGGGTTGGATTGGAT9406914TGATTTGGATTGGGTTGGATTGGTTTGAATGGGTTTGGATTGGTTTGGTT
Callogorgia gracilis genome assembly, chromosome: 9.
OZ123365.1:9408647-9408666
TGATTTGAATTGGATTGGGTTGGATTGGAT9408647TGATTTGGATTGGGTTGGATTGGTTTGAATGGGTTTGGATTGGTTTGGTT
Callogorgia gracilis genome assembly, chromosome: 9.
OZ123365.1:9416301-9416320
TGATTTGAATTGGATTGGGTGGGATTGGAT9416301TGATTTGGATTGGGTTGGATTGGTTTGAATGGGTTTGGATTGGTTTGGTT
Turbinaria reniformis genome assembly, chromosome: 5.
OZ123458.1:29978854-29978873
CCGGATTAAGGCTCTTGTGTGAAGTTGAAT29978854TGATTTGGATTGGGTTGGATAGTGCCACCGAAGGTTGTGTTTGTGTAATT
Rheumaptera undulata genome assembly, chromosome: 7.
OZ174073.1:15899688-15899707
GAAGCTGCTGAACCTTCTCGATGCCCGCCA15899688TGATTTGGATTGGGTTGGATCGGAGCGTGGACTTCATCAGACGGTTTCTC
Naticarius hebraeus genome assembly, chromosome: 3.
OZ204914.1:13788628-13788647
TGGATTGATTTGGATTGGATTGAATTGAAT13788628TGATTTGGATTGGGTTGGATTGGGTTGAACTGGATTGGATTGAACTGAAT
Barbatula barbatula genome assembly, chromosome: 12.
OX344779.1:19021159-19021178
TCTCTGTGGCAGTATTACAGCGCTACATAC19021159TGATTTGGATTGGGTTGGATAGGCACAGCTCTGGCTTTCTTTGGATCTGG
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:24959867-24959886
TTGGATTGGATTGGGTGCAGTTACTGGGAT24959867TGATTTGGATTGGGTTGGATGCGTTACTTGGATTGGATTGCATTGAATTG
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:24968819-24968838
TTGGATTGGATTGGGTGCAGTTACTGGGAT24968819TGATTTGGATTGGGTTGGATGCGTTACTTGGATTGGATTGCATTGAATTG
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:24973189-24973208
TTGGATTGGATTGGGTGCAGTTACTGGGAT24973189TGATTTGGATTGGGTTGGATGCGTTACTTGGATTGGATTGCATTGAATTG
Mustelus asterias genome assembly, chromosome: 21.
OZ172910.1:24988317-24988336
TTGGATTGGATTGGGTGCAGTTACTGGGAT24988317TGATTTGGATTGGGTTGGATGCGTTACTTGGATTGGATTGCATTGAATTG
Mustelus asterias genome assembly, chromosome: 23.
OZ172912.1:6102919-6102938
TTGCATGCCGTTCCCTGGATTGGATTGGAT6102919TGATTTGGATTGGGTTGGATTGGATTTGATGCCGTTCCTTGGATTGGATT
Mustelus asterias genome assembly, chromosome: 23.
OZ172912.1:9599981-9600000
TTGGATTGGACCTGATTGTATGCCGATCCT9599981TGATTTGGATTGGGTTGGATTGTATTGAATTGGATAGAATGCCGTTCCTT
Lissotriton helveticus genome assembly, chromosome: 3_1.
OZ180046.1:706917464-706917483
TGGGGTGGATTTGATTGGATTGGGGTGGGG706917464TGATTTGGATTGGGTTGGATTGGATTGGGGTGCGGTGCGGTGGGTTTTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCCAACCCAATCCAAATCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCAACCCAATCCAAATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.355 | 0.346 | search_plus_done; http://172.18.8.135:50800/match?q=ATCCAACCCAATCCAAATCA&k=0&no_gap=0&offset=0&limit=50
0.543 | 0.187 | search_minus_done; http://172.18.8.135:50800/match?q=TGATTTGGATTGGGTTGGAT&k=0&no_gap=0&offset=0&limit=16
0.576 | 0.033 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).