GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 23:01:43, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Oryctolagus cuniculus genome assembly, chromosome: 5.
OZ175188.1:132800276-132800295
CCCAGCTGAAGATCTCCTGGCTGAAGTTGA132800276ATCCAGAAACTCCATCCAAGTCTTTCATGTAGGTGACAGGGTGCACATTA
Lotus japonicus genomic DNA, chromosome 2, clone: LjT33B06, TM1150.
AP007846.2:14398-14417
GGCAGTTGCGGTGGTGGTTGTGGCGGTGAG14398ATCCAGAAACTCCATCCAAGGTGGAAGAAGCTGAGCTTCGGTGTAGAGAG
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:1117768131-1117768150
GATCATACGGCGATATAAGAACCTAAAAAT1117768131ATCCAGAAACTCCATCCAAGAAACAATAGTGTGTCTTCCCAGCTAGTCTC
Mustelus asterias genome assembly, chromosome: 19.
OZ172908.1:50141481-50141500
TTTTCAATAAATGAGTGTCTTTTATGGTGC50141481ATCCAGAAACTCCATCCAAGTATTTCAAAAACAATATGGGGTTCCACGTG
Sylvilagus floridanus genome assembly, chromosome: 24.
OX463246.1:8145959-8145978
TGCCAGGACCCCTGCCACCCAGGGGGGAGA8145959CTTGGATGGAGTTTCTGGATCCTGGCTTTATTTGGCCTATACCTGGATGT
Oryctolagus cuniculus genome assembly, chromosome: 1.
OZ175184.1:206864435-206864454
GAAGATAGCCCCTGACACCCACCTGGGAGA206864435CTTGGATGGAGTTTCTGGATCCTGACTTGGCCTTGGCCAGAACAGGCTGT
Oryctolagus cuniculus genome assembly, chromosome: 14.
OZ175198.1:8106159-8106178
TGCTTGGACCCCTGCCACCCAGGTGGGAGA8106159CTTGGATGGAGTTTCTGGATCCTGGCTTTGTTTGGCCTATACCTGGATGT
Oryctolagus cuniculus genome assembly, chromosome: 18.
OZ175202.1:43348925-43348944
TATTTGGATGCCTGCCACCCATGTAGAAGA43348925CTTGGATGGAGTTTCTGGATCCTGGATTCAACTTGGCTCAATCCCCACCA
Lotus japonicus cDNA clone:MWL043d09_r, 5' end.
AV408603.1:44-63
CTCTCTACACCGAAGCTCAGCTTCTTCCAC44CTTGGATGGAGTTTCTGGATCTCACCGCCACAACCACCACCGCAACTGCC
Lotus japonicus cDNA, clone: LjFL2-001-CC11, 5' end, suspension-cultured cells treated with salicylic acid or methyljasmonate.
BW621509.1:123-142
CTCTCTACACCGAAGCTCAGCTTCTTCCAC123CTTGGATGGAGTTTCTGGATCTCACCGCCACAACCACCACCGCAACTGCC
Lotus japonicus mRNA, clone: GNr033e11, 5' end sequence.
DC595055.1:57-76
CTCTCTACACCGAAGCTCAGCTTCTTCCAC57CTTGGATGGAGTTTCTGGATCTCACCGCCACAACCACCACCGCAACTGCC
Lotus japonicus cDNA, clone: LjFL3-005-CG03, 5'-end sequence.
FS319863.1:58-77
CTCTCTACACCGAAGCTCAGCTTCTTCCAC58CTTGGATGGAGTTTCTGGATCTCACCGCCACAACCACCACCGCAACTGCC
Lotus japonicus cDNA, clone: LjFL3-032-DE04, 5'-end sequence.
FS329030.1:98-117
CTCTCTACACCGAAGCTCAGCTTCTTCCAC98CTTGGATGGAGTTTCTGGATCTCACCGCCACAACCACCACCGCAACTGCC
Lotus japonicus cDNA, clone: LjFL2-001-CC11, HTC.
AK337869.1:80-99
CTCTCTACACCGAAGCTCAGCTTCTTCCAC80CTTGGATGGAGTTTCTGGATCTCACCGCCACAACCACCACCGCAACTGCC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:78935758-78935777
CTCTCTACACCGAAGCTCAGCTTCTTCCAC78935758CTTGGATGGAGTTTCTGGATCTCACCGCCACAACCACCACCGCAACTGCC
Lymantria dispar genome assembly, chromosome: 28.
OY755153.1:465906-465925
TCGGTCAAGAAAGTACCAATTGAAAGTCCA465906CTTGGATGGAGTTTCTGGATTTGTTTGTGTGTGAAGTGAGAATTTTCGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCCAGAAACTCCATCCAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCAGAAACTCCATCCAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.186 | 0.177 | search_plus_done; http://172.18.8.135:50800/match?q=ATCCAGAAACTCCATCCAAG&k=0&no_gap=0&offset=0&limit=50
0.550 | 0.364 | search_minus_done; http://172.18.8.135:50800/match?q=CTTGGATGGAGTTTCTGGAT&k=0&no_gap=0&offset=0&limit=46
0.558 | 0.008 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).