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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 08:17:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Electrona antarctica genome assembly, chromosome: 11.
OX578256.1:8094166-8094185
TTACAAAAAAAAACATATCTTATTTTATAA8094166ATCCTAAATGGTGGTGCTGCTGGGTCCATCATTGTTGAAGGTTCATGTTA
Protomyctophum bolini genome assembly, chromosome: 9.
OZ001274.1:38639937-38639956
CACCACTCAAAAATATATGTTATTTTATAA38639937ATCCTAAATGGTGGTGCTGCTGCAGGGTCCATCGTTGTTGAAGGTTCATG
Dianthus caryophyllus mRNA, clone: CES04E15, 5' end sequence.
FY383713.1:423-442
AGAAACAATTCGGGTCAATTTGACCCGGGT423GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
Dianthus caryophyllus mRNA, clone: CES21_M18, 5' end sequence.
FY390327.1:527-546
AGAAACAATTCGGGTCAATTTGACCCGGGT527GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
Dianthus caryophyllus mRNA, clone: CES28N07, 5' end sequence.
FY392967.1:512-531
AGAAACAATTCGGGTCAATTTGACCCGGGT512GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
Dianthus caryophyllus mRNA, clone: CES29I21, 5' end sequence.
FY393243.1:410-429
AGAAACAATTCGGGTCAATTTGACCCGGGT410GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
TSA: Dianthus caryophyllus mRNA, contig: CAK09.344.C11.
FX297171.1:590-609
AGAAACAATTCGGGTCAATTTGACCCGGGT590GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA
TSA: Dianthus superbus Ds_CL209Contig1 mRNA sequence.
JL383291.1:472-491
AGAAACAATTCGGGTCAATTTGACCCGGGT472GCAGCACCACCATTTAGGATAGGTGATATCCGAAATGCGATACCGAAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCCTAAATGGTGGTGCTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCTAAATGGTGGTGCTGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.353 | 0.344 | search_plus_done; http://172.18.8.135:50400/match?q=ATCCTAAATGGTGGTGCTGC&k=0&no_gap=0&offset=0&limit=50
0.748 | 0.396 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGCACCACCATTTAGGAT&k=0&no_gap=0&offset=0&limit=48
0.752 | 0.004 | cgi_end;

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