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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:07:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_33713.
FX717970.1:97-116
CTGAATGAAGAGCTTGGACAAGTGGATACA97ATCCTCTCAGACAAGACAGGGACATTAACTTGTAACTCCATGGAGTTCAT
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 882 unordered pieces.
FJ789639.1:1908430-1908449
CTGAATGAAGAGCTTGGACAAGTGGATACA1908430ATCCTCTCAGACAAGACAGGGACATTAACTTGTAACTCCATGGAGTTCAT
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 24 unordered pieces.
FJ789655.1:216971-216990
CTGAATGAAGAGCTTGGACAAGTGGATACA216971ATCCTCTCAGACAAGACAGGGACATTAACTTGTAACTCCATGGAGTTCAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB034A02, complete sequence.
AC189308.2:32509-32528
CTGAATGAAGAGCTTGGACAAGTGGATACA32509ATCCTCTCAGACAAGACAGGGACATTAACTTGTAACTCCATGGAGTTCAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB026C23, complete sequence.
AC189291.2:23076-23095
ATGAACTCCATGGAGTTACAAGTTAATGTC23076CCTGTCTTGTCTGAGAGGATTGTATCCACTTGTCCAAGCTCTTCATTCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCCTCTCAGACAAGACAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCTCTCAGACAAGACAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.181 | 0.173 | search_plus_done; http://172.18.8.135:50400/match?q=ATCCTCTCAGACAAGACAGG&k=0&no_gap=0&offset=0&limit=50
0.264 | 0.083 | search_minus_done; http://172.18.8.135:50400/match?q=CCTGTCTTGTCTGAGAGGAT&k=0&no_gap=0&offset=0&limit=46
0.265 | 0.001 | cgi_end;

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