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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-11 23:17:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Sciurus vulgaris genome assembly, chromosome: 5.
LR738615.1:164636139-164636157
TGACCGTCCTCTCCCTGTTATTCTTGGTCC164636139ATCCTTCACCCACCAGCCTCTTCCACACCCAGTCACCCTCACAGCCTCG
Felis catus Senzu DNA, chromosome: A1, American Shorthair breed.
AP023152.1:71723905-71723923
GCTTCAGAACCATGAGAGGATTCCTGGCCA71723905ATCCTTCACCCACCAGCCTTCTGCATCAAACCATATAGGATCAGACCCT
Trachurus trachurus genome assembly, chromosome: 16.
LR991639.1:8909081-8909099
TGAAGCTGTTTACTCTGCACTATGTGTAGG8909081ATCCTTCACCCACCAGCCTTTGTCTCCCAGGTTAGGAATGTGTATAAAC
Podarcis lilfordi genome assembly, chromosome: 9.
OX395134.1:39162109-39162127
TACTTCTGAGCTATAGTCCCCTCTCCACAC39162109ATCCTTCACCCACCAGCCTGCCCTCCTGCTGCACACACAGCCACACTCC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_12247.
FX695244.1:1099-1117
TTGCGTCCATAGCCTCCGCTGCACCCAACC1099ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus var. napus clone Bna.FRI_chrA03_6052791_25629-3, genomic survey sequence.
KM388082.1:1595-1613
TGGCGTCCATAGCCTCCGCTGCACCCAACC1595ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus var. napus clone Bna.FRI_chrA03_6052791_Campino, genomic survey sequence.
KM388083.1:1525-1543
TTGCGTCCATAGCCTCCGCTGCACCCAACC1525ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus subsp. rapifera clone Bna.FRI_chrA03_6052791_MagresPajberg, genomic survey sequence.
KM388084.1:1671-1689
TGGCGTCCATAGCCTCCGCTGCACCCAACC1671ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus var. napus clone Bna.FRI_chrA03_6052791_Silona, genomic survey sequence.
KM388085.1:1548-1566
TGGCGTCCATAGCCTCCGCTGCACCCAACC1548ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus var. napus clone Bna.FRI_chrC03_8149430_25629-3, genomic survey sequence.
KM388090.1:1578-1596
TTGCATCCACAGCCTCCGCTGCACCCAACC1578ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus var. napus clone Bna.FRI_chrC03_8149430_Campino, genomic survey sequence.
KM388091.1:1523-1541
TTGCATCCACAGCCTCCGCTGCACCCAACC1523ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus subsp. rapifera clone Bna.FRI_chrC03_8149430_MagresPajberg, genomic survey sequence.
KM388092.1:1570-1588
TTGCATCCACAGCCTCCGCTGCACCCAACC1570ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus var. napus clone Bna.FRI_chrC03_8149430_Silona, genomic survey sequence.
KM388093.1:1578-1596
TTGCATCCACAGCCTCCGCTGCACCCAACC1578ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrF153M15, complete sequence.
AC240938.1:14474-14492
TTGCGTCCATAGCCTCCGCTGCACCCAACC14474ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:6964640-6964658
TTGCGTCCATAGCCTCCGCTGCACCCAACC6964640ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus genome assembly, chromosome: A03.
HG994357.1:6997940-6997958
TGGCGTCCATAGCCTCCGCTGCACCCAACC6997940ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica napus genome assembly, chromosome: C03.
HG994367.1:9467938-9467956
TTGCATCCACAGCCTCCGCTGCACCCAACC9467938ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica rapa genome, scaffold: A03.
LR031572.1:6902218-6902236
TGGCGTCCATAGCCTCCGCTGCACCCAACC6902218ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:9417202-9417220
TTGCATCCACAGCCTCCGCTGCACCCAACC9417202ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:6898233-6898251
TGGCGTCCATAGCCTCCGCTGCACCCAACC6898233ATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGC
Xanthia icteritia genome assembly, chromosome: 12.
OX421942.2:900454-900472
GGAGCATGAGCCTCGGTTCCTGAGACGAGC900454ATCCTTCACCCACCAGCCTCTGGACTCAAGACAGTTCAACTACAGACGC
Pyrrhosoma nymphula genome assembly, chromosome: 5.
OY754331.1:161376231-161376249
TCTTTCCTTTCTTTCCCCATTCCTCAGGTA161376231ATCCTTCACCCACCAGCCTACCAACATTTCCTCCATGGATCAAATGATC
Pyrrhosoma nymphula genome assembly, chromosome: X.
OY754332.1:141624131-141624149
TTTCTCCACTAACCTTCCATTTCCCAAATA141624131ATCCTTCACCCACCAGCCTACCTACCTGCTCTTAATGACAAAAATGATC
Agonopterix heracliana genome assembly, chromosome: 10.
OY856317.1:676166-676184
CCGTGATGACCAGCGCTTCGTTCGCCGAGC676166ATCCTTCACCCACCAGCCTCTAGACCGACGCCTGCATCACCGCCGGCAA
Sus scrofa scrofa breed NS chromosome 15.
CP071566.1:34982494-34982512
GAAGACAACAAAGAGGTCAGTGGTTTCCAG34982494AGGCTGGTGGGTGAAGGATGGTGGATTTTCCAGGCAGTGGAACTACTCT
Sus scrofa genome assembly, chromosome: 15.
OY997222.1:48254217-48254235
GAAGACAACAAAGAGGTCAGTGGTTTCCAG48254217AGGCTGGTGGGTGAAGGATGGTGGATTTTCCAGGCAGTGGAACTACTCT
47RDOAH_UP_042_A02_19AUG2004_016 O. Alba 47RDOAH Brassica oleracea cDNA 5', mRNA sequence.
DY029463.1:265-283
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG265AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
BNAEN3GH_UP_184_D11_25NOV2006_089 Brassica napus BNAEN3GH Brassica napus cDNA 5', mRNA sequence.
EV005072.1:314-332
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG314AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAA
BNAOV1GH_T3_078_H12_17SEPT2007_082 BNAOV1GH Brassica napus cDNA 5', mRNA sequence.
GR448579.1:277-295
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG277AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
BNAPO1GH_T3_012_D04_15JUN2007_026 BNAPO1GH Brassica napus cDNA 5', mRNA sequence.
GR451186.1:692-710
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG692AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAA
BNAPO2GH_T3_015_F10_19JUN2007_070 BNAPO2GH Brassica napus cDNA 5', mRNA sequence.
GR454231.1:709-727
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG709AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
CCPd_EST_580 Piriformospora indica colonized with Chinese cabbage roots library Brassica rapa subsp. chinensis cDNA, mRNA sequence.
JZ469738.1:261-279
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG261AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_70461.
FX774010.1:29-47
GGAGGCGGCTGCTGTTGCGTGGAAGAAG29AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAA
BOGRJ75TF BOGR Brassica oleracea genomic clone BOGRJ75, genomic survey sequence.
BH479860.1:661-679
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG661AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-480O15.
CU915364.2:53299-53317
GAAGACAACAAAGAGGTCAGTGGTTTCCAG53299AGGCTGGTGGGTGAAGGATGGTGGATTTTCCAGGCAGTGGAACTACTCT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-288H14.
FP565899.1:31000-31018
GAAGACAACAAAGAGGTCAGTGGTTTCCAG31000AGGCTGGTGGGTGAAGGATGGTGGATTTTCCAGGCAGTGGAACTACTCT
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:69824606-69824624
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG69824606AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica rapa FRIGIDA (FRI) mRNA, complete cds.
HQ615935.1:715-733
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG715AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAA
Brassica rapa subsp. pekinensis cultivar Chifu 401-42 FRIGIDA-like protein (FRI) gene, FRI.a-1 allele, complete cds.
JN015481.1:722-740
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG722AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAA
Brassica oleracea var. italica isolate E8 FRIGIDA gene, complete cds.
JN191392.1:685-703
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG685AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica oleracea var. italica isolate E1 FRIGIDA gene, complete cds.
JN191393.1:715-733
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG715AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica oleracea var. alboglabra isolate A12 FRIGIDA-a gene, complete cds.
JN191450.1:715-733
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG715AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica rapa subsp. chinensis cultivar Pakchoi FRIGIDA-like protein (FRI) gene, FRI.a-2 allele, complete cds.
JN882592.1:725-743
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG725AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCCA
Brassica oleracea var. acephala cultivar Frosty FRIGIDA-like protein (FRI) gene, FRI.a-1 allele, complete cds.
JN882594.1:691-709
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG691AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica napus isolate BnaA.FRI.a FRIGIDA-like protein gene, complete cds.
JN936850.1:2512-2530
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG2512AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCCA
Brassica napus isolate BnaX.FRI.d FRIGIDA-like protein gene, complete cds.
JN936853.1:1059-1077
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG1059AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica oleracea var. alboglabra cultivar A12DH FRIGIDA-like protein (FRI) gene, FRI-a-2 allele, complete cds.
JN989363.1:722-740
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG722AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica juncea var. juncea FRIGIDA-like protein (FRI) gene, FRI.a-1 allele, complete cds.
KC937068.1:715-733
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG715AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAA
Brassica carinata cultivar Gommenzer (Amharic) FRIGIDA-like protein (FRI.a) gene, FRI.a-1 allele, complete cds.
KF896287.1:722-740
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG722AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTGTGGATGCAA
Brassica juncea cultivar DN-12436 FRIGIDA-like protein (FRI.a1) gene, partial cds.
KY218734.1:615-633
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG615AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCCA
Brassica juncea cultivar DN-12436 FRIGIDA-like protein (FRI.a2) gene, partial cds.
KY218735.1:618-636
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG618AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCCA
Brassica juncea cultivar RLC-3 FRIGIDA-like protein (FRI) gene, partial cds.
KY218736.1:618-636
GCGGAGGCGGCTGCTGTTGCGTGGAAGAAG618AGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCCA
Microvirga lotononidis strain HAMBI_3237 chromosome, complete genome.
CP141048.1:3123920-3123938
GGCGGCGAAGGACATCAGGCGCGCACGGCC3123920AGGCTGGTGGGTGAAGGATACTCTATTGCGATAAATATGTCTCTGTCGT
Eristalis tenax genome assembly, chromosome: 2.
HG993125.1:60046096-60046114
CGATAATCATTTCATGAGGATGGTGGGTGG60046096AGGCTGGTGGGTGAAGGATGGAAGATGGCAGGTGGAAGGTTCTGCTACG
Spodoptera exigua genome assembly, chromosome: 11.
LR824612.2:14992082-14992100
GCGTCTGAAGTTGAACTGTCGGGAGTCCAA14992082AGGCTGGTGGGTGAAGGATGCTCGTCTCAGGAACCGGGGCTCGTGGTCC
Trichobilharzia szidati genome assembly, chromosome: 7.
OX235277.1:7287345-7287363
TATCCGCCTGTAGTTGAAACGATGCTTCCC7287345AGGCTGGTGGGTGAAGGATGTTGTTTCTTTCAGGCTCCTTCCATTTATG
Anorthoa munda genome assembly, chromosome: 8.
OX243901.1:32971963-32971981
ACGTCTGTAGTTAAACTGTCTTGAGTCTAA32971963AGGCTGGTGGGTGAAGGATGCTCTTCTCAGGAACCGGGGCTCGTGGTCC
Agonopterix alstromeriana genome assembly, chromosome: 10.
OZ004671.1:17802318-17802336
TTGGCGGCGATGATGCAAACGACGGTCTAG17802318AGGCTGGTGGGTGAAGGATGCTCGGCGAACGAAGCGCTGGTCATCGCGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCCTTCACCCACCAGCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCCTTCACCCACCAGCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.663 | 0.654 | search_plus_done; http://172.18.8.135:50400/match?q=ATCCTTCACCCACCAGCCT&k=0&no_gap=0&offset=0&limit=50
1.274 | 0.611 | search_minus_done; http://172.18.8.135:50400/match?q=AGGCTGGTGGGTGAAGGAT&k=0&no_gap=0&offset=0&limit=26
1.297 | 0.023 | cgi_end;

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