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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:38:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vanessa cardui genome assembly, chromosome: 12.
LR999936.1:5553906-5553925
TTAAATCGATTAGATTTATAGTATTTTCCA5553906ATCGAAGAAGGAATAGAAATAAATAAACCTTAGTTTTACGTGCTACACGG
Ophonus ardosiacus genome assembly, chromosome: 3.
OW964825.1:41524115-41524134
GCAACGAAGTTATATCCCGCAAGTAACAGT41524115ATCGAAGAAGGAATAGAAATAGCAACATCGATTGTTATACTCGTAAATTA
Lithosia quadra genome assembly, chromosome: 14.
OY754887.1:10680192-10680211
ATGGATGATTTAATGACTGGCTGTAATAGC10680192ATCGAAGAAGGAATAGAAATATATAAACAAATAACACACTTACTAGAAAA
Parietaria judaica genome assembly, chromosome: 7.
OX940866.1:2123579-2123598
GTTGGACCACAAGTAGTTGTTTGGCCCAAT2123579ATTTCTATTCCTTCTTCGATATATTTTCTCAAAGAAGGGATGCGTAACAC
Nymphalis polychloros genome assembly, chromosome: 18.
HG992259.1:6474574-6474593
GGATTTGACACATGATACAATGTATTATTT6474574ATTTCTATTCCTTCTTCGATTGTAGTAGGCTACCCATCCAGGTCTTTATC
Lithosia quadra genome assembly, chromosome: 13.
OY754886.1:288280-288299
TTTTCTAGTAAGTGTGTTATTTGTTTATAT288280ATTTCTATTCCTTCTTCGATGCTATTACAGCCAGTCATTAAATCATCCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCGAAGAAGGAATAGAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCGAAGAAGGAATAGAAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.176 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=ATCGAAGAAGGAATAGAAAT&k=0&no_gap=0&offset=0&limit=50
0.256 | 0.079 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTCTATTCCTTCTTCGAT&k=0&no_gap=0&offset=0&limit=47
0.258 | 0.002 | cgi_end;

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