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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:22:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cervus elaphus genome assembly, chromosome: 13.
OU343090.1:16964173-16964192
AAGGCTCATCAAGCTAGATCCCCTGGAAGC16964173ATCTTCCACTCCTTCCTCCCCATCACTGCCACCCCTTAATCAATTAAGCA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 16.
OX459952.2:13775380-13775399
AAGGCTCATCAAGCTAGATCCCCTGGAAGC13775380ATCTTCCACTCCTTCCTCCCCATCACTGCCACCCCTTAATCAATTAAGCA
Muntiacus reevesi genome assembly, chromosome: 15.
OZ005639.1:11905751-11905770
AAGGCTCGTCAAGCTAGATCCCCTGGAAGC11905751ATCTTCCACTCCTTCCTCCCCATCACTGCCACCCCTTAATCAATTAAGCA
Sequence 14808 from patent US 11624072.
OS850388.1:151-170
TACCAGTGGCTGGACGACACCGTCGGCCTC151ATCTTCCACTCCTTCCTCCCCGTCCCCTACTTCTCCTGGATCATCGACGC
Sequence 15736 from patent US 11624072.
OS851316.1:151-170
TACCAGTGGCTGGACGACACCGTCGGCCTC151ATCTTCCACTCCTTCCTCCCGTCCCTTACTTCTCCTGGAAGTCATCGACG
Sequence 16646 from patent US 11624072.
OS852226.1:151-170
TACCAGTGGCTTGACGACGCCGTCGGTCTC151ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGATCATCGACGCC
Sequence 17137 from patent US 11624072.
OS852717.1:151-170
TACCAGTGGCTTGACGACACCGTCGGCCTC151ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTCATCGAC
Sequence 18209 from patent US 11624072.
OS853789.1:151-170
CACCAGTGGCTGGACGACACCGTCGGCCTC151ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTCATCGAC
Sequence 21150 from patent US 11624072.
OS856730.1:151-170
TACCAGTGGCTTGACGACACCGTCGGCCTC151ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTCATCGAC
Sequence 21920 from patent US 11624072.
OS857500.1:151-170
TACCAGTGGCTTGACGACACCGTCCAACTC151ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCCACTGGAAAGTCATCGA
Sequence 22112 from patent US 11624072.
OS857692.1:151-170
TACCAGTGGCTTGACGACACCGTCGGTCTC151ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCCCACGGCTTGACCC
Sequence 47107 from patent US 11624072.
OS882687.1:150-169
TACCAGTGGCTGGACGACACCGTCGGCCTC150ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTACAGGCA
Sequence 48585 from patent US 11624072.
OS884165.1:148-167
TACCAGTGGCTTGACGACACCGTCGGTCTC148ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTACAGTCA
Sequence 49264 from patent US 11624072.
OS884844.1:148-167
TACCAGTGGCTTGACGACACCGTCGGTCTC148ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTACAGTCA
Sequence 51901 from patent US 11624072.
OS887481.1:150-169
TACCAGTGGCTGGACGACACCGTCGGTCTC150ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTACAGTCA
Sequence 53088 from patent US 11624072.
OS888668.1:150-169
CACCAGTGGCTGGACGACACCGTCGGTCTC150ATCTTCCACTCCTTCCTCCCCGTCCCTTACTTCTCCTGGAAGTACAGTCA
Avena insularis genome assembly, chromosome: 1C.
OU342338.1:150426484-150426503
AGCATGTACCACGTCATCTTCGGACACGAC150426484ATCTTCCACTCCTTCCTCCCAAGGCCATGCTTTGTCTACAACAAACTCAA
Avena insularis genome assembly, chromosome: 3C.
OU342340.1:46026601-46026620
AGCGTGTACCACGTCATCTTCGGATGTGAC46026601ATCTTCCACTCCTTCCTCCCAATGCCATGTTTGTCTACAACAAGCTCAAG
Avena insularis genome assembly, chromosome: 3C.
OU342340.1:202952306-202952325
AGCGTGTACCACATCATGTTTGGATGCAAC202952306ATCTTCCACTCCTTCCTCCCCAGGCCATGCTTTGTCTATAACAAGCTCAA
Avena insularis genome assembly, chromosome: 3C.
OU342340.1:282577275-282577294
AGCGTTTACCACGTCATCTTCAGACGCGAC282577275ATCTTCCACTCCTTCCTCCCCAGGCCATGCTTCATCTACAACAAGCTCAA
Avena insularis genome assembly, chromosome: 5C.
OU342342.1:223849689-223849708
AGCATGTACCACGCCATCTTTGGCTGTGAC223849689ATCTTCCACTCCTTCCTCCCAAGGTCATGCTTCGTCTACAACAAGCTCAA
Avena sativa genome assembly, chromosome: 3C.
OU342387.1:45142225-45142244
AGCGTGTACCACGTCATCTTCGGATGTGAC45142225ATCTTCCACTCCTTCCTCCCAATGCCATGTTTGTCTACAACAAGCTCAAG
Avena sativa genome assembly, chromosome: 3C.
OU342387.1:328069323-328069342
AGCGTGTACCACGTCATGTTTGGATGCAAC328069323ATCTTCCACTCCTTCCTCCCCAGGCCATGCTTTGTCTATAACAAGCTCAA
Avena sativa genome assembly, chromosome: 4C.
OU342388.1:397207791-397207810
AGTGTGTACCACGTCATCTTTGGACGCAAT397207791ATCTTCCACTCCTTCCTCCCAATGCCATGCTTTGTCTACAACAAACTCAA
Avena sativa genome assembly, chromosome: 6C.
OU342390.1:349492278-349492297
GAGCGTGTACCACATCATATTTGGCGCGAC349492278ATCTTCCACTCCTTCCTCCCCAGGCCATGCTTTGTCTACAACAAGCTCAA
Avena eriantha genome assembly, chromosome: 1C.
OU342740.1:203940402-203940421
GAGTGTGTACCACGTAATTTCAGACGCGAC203940402ATCTTCCACTCCTTCCTCCCGAGGCCCTGCTTTGTCTACAACAAACTCAA
Avena eriantha genome assembly, chromosome: 1C.
OU342740.1:512970867-512970886
AGCGTGTACCATGTCATATTTGGATGCGAC512970867ATCTTCCACTCCTTCCTCCCTAGGCCATGTTTCGTCTACAACAATCTCAA
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:339446799-339446818
AGCGTGTACTATGTCATCTTTGGACGCGAC339446799ATCTTCCACTCCTTCCTCCCAAGGCCATGCCTTTTCTACAACAAGCTCAA
Avena eriantha genome assembly, chromosome: 6C.
OU342745.1:62494903-62494922
AGCATGTACCACGTCATCTTCGGATGTGAC62494903ATCTTCCACTCCTTCCTCCCAAGGCCATGCTTTGTCTACAACAAACTCAA
Avena sativa genome assembly, chromosome: 10.
OV702288.1:44551766-44551785
AGCGTGTACCACGTCATCTTCGGATGTGAC44551766ATCTTCCACTCCTTCCTCCCAATGCCATGTTTGTCTACAACAAGCTCAAG
Avena sativa genome assembly, chromosome: 10.
OV702288.1:371458502-371458521
AGCGTGTACCACGTCATGTTTGGATGCAAC371458502ATCTTCCACTCCTTCCTCCCCAGGCCATGCTTTGTCTATAACAAGCTCAA
Avena sativa genome assembly, chromosome: 11.
OV702289.1:412346835-412346854
AGTGTGTACCACGTCATCTTTGGACGCAAT412346835ATCTTCCACTCCTTCCTCCCAATGCCATGCTTTGTCTACAACAAACTCAA
Avena sativa genome assembly, chromosome: 13.
OV702291.1:382583707-382583726
GAGCGTGTACCACATCATATTTGGCGCGAC382583707ATCTTCCACTCCTTCCTCCCCAGGCCATGCTTTGTCTACAACAAGCTCAA
Limnephilus marmoratus genome assembly, chromosome: 12.
OU862917.1:31393657-31393676
AATTCCTACCCATACCTCTTTCCTTCGTAG31393657ATCTTCCACTCCTTCCTCCCCTTAAAAAAACCTTCCACACAGCACCCCAA
Platycnemis pennipes genome assembly, chromosome: 2.
OW121848.1:84454684-84454703
CATTTCCTCACTCAACCTTGCCCTCTTTCG84454684ATCTTCCACTCCTTCCTCCCCCCCCCCTCTTGGCTACCTCCTCCCGTTCA
Megachile willughbiella genome assembly, chromosome: 9.
OX243802.1:7704071-7704090
CTTGAATCTCCGTCGGGAGTTGCCTCTTCA7704071ATCTTCCACTCCTTCCTCCCATTTGTTTCGCCTTTTTCTTTTATTTAATC
Rangifer tarandus platyrhyncus genome assembly, chromosome: 12.
OX459948.2:2413439-2413458
AAGGTGAAGAAGATGAAGATGATGATGAGG2413439GGGAGGAAGGAGTGGAAGATGAAGGAGAAGATGACTAATGGAACACTGAT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 11.
OX596095.1:823455-823474
AAGGTGAAGAAGATGAAGATGATGATGAGG823455GGGAGGAAGGAGTGGAAGATGAAGGAGAAGATGACTAATGGAACACTGAT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 16.
OX596100.1:54422494-54422513
TGCTTAATTGATTAAGGGGTGGCAGTGATG54422494GGGAGGAAGGAGTGGAAGATGCTTCCAGGGGATCTAGCTTGATGAGCCTT
Avena sativa genome assembly, chromosome: 1C.
OU342385.1:146266400-146266419
TTGAGTTTGTTGTAGACAAAGCATGGCCTT146266400GGGAGGAAGGAGTGGAAGATGTCGTGTCCGAAGATGACGTGGTACATGCT
Avena eriantha genome assembly, chromosome: 2C.
OU342741.1:274602904-274602923
TTGAGTTTGTTGTAGACAAAGCATGGCCTT274602904GGGAGGAAGGAGTGGAAGATGTCAGGTCCGAAGATGACGTGGTACACGCT
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:230784863-230784882
TTGAGCTTGTTGTAGACAAAACATGGCCTA230784863GGGAGGAAGGAGTGGAAGATGTCGCATCCAAATATGTCGTGGTACACTTC
Avena eriantha genome assembly, chromosome: 5C.
OU342744.1:354120177-354120196
TTGATCTTGTTGTAGATGAAGCATGACCTT354120177GGGAGGAAGGAGTGGAAGATGTCGTGGCCAAAGATGACGTGGTACATGCT
Avena sativa genome assembly, chromosome: 8.
OV702286.1:165166938-165166957
TTGAGTTTGTTGTAGACAAAGCATGGACTT165166938GGGAGGAAGGAGTGGAAGATGTCGTGTCCGAAGATGACGTGGTACATGCT
Osmia bicornis bicornis genome assembly, chromosome: 5.
OU015508.1:3734670-3734689
GGCGAAATGAAATAAAAAGGCGAAACAAAT3734670GGGAGGAAGGAGTGGAAGATTGAAGAGGCAACTCCCGATGGAGATTCAAG
Megachile ligniseca genome assembly, chromosome: 5.
OX243781.1:8779632-8779651
GATTAAATAAAAGAAAAAGGCGAAACAAAT8779632GGGAGGAAGGAGTGGAAGATTGAAGAGGCAACTCCCGACGGAGATTCAAG
Megachile leachella genome assembly, chromosome: 1.
OY756247.1:21190223-21190242
GATTAAATAAAAGAAAAAGGCGAAACAAAT21190223GGGAGGAAGGAGTGGAAGATTGAAGAGGCAACTCCCGACGGAGATTCAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCTTCCACTCCTTCCTCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCTTCCACTCCTTCCTCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.989 | 0.981 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTTCCACTCCTTCCTCCC&k=0&no_gap=0&offset=0&limit=50
1.121 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=GGGAGGAAGGAGTGGAAGAT&k=0&no_gap=0&offset=0&limit=14
1.129 | 0.008 | cgi_end;

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