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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:59:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 63 from patent US 10808260.
MV813438.1:1-24
1ATCTTGACTGAGCGTGGTTATTCC
Sequence 63 from patent US 10995342.
MX642773.1:1-24
1ATCTTGACTGAGCGTGGTTATTCC
se02g06.y1 Gm-c1013 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1013-2387 5' similar to SW:ACTB_SOLTU P30171 ACTIN 97. [1], mRNA sequence.
AW132335.1:62-85
GGTCGTGACCTCACAGATTTCTTGATGAAA62ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
sl63h12.y1 Gm-c1027 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1027-6048 5' similar to SW:ACTB_SOLTU P30171 ACTIN 97. [1], mRNA sequence.
AW761157.1:211-234
GGTCGTGACCTCACAGATTTCTTGATGAAA211ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
sl64f08.y1 Gm-c1027 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1027-6112 5' similar to SW:ACT3_SOLTU P30167 ACTIN 58. [1], mRNA sequence.
AW761214.1:170-193
GGTCGTGACCTCACAGATTTCTTGATGAAA170ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAACCGAGCGGGAAATTGTA
sn09c11.y1 Gm-c1016 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1016-10989 5' similar to SW:ACTB_ARATH P53496 ACTIN 11. [1], mRNA sequence.
BE057950.1:61-84
GGTCGTGACCTCACAGATTTCTTGATGAAA61ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
st27c09.y1 Gm-c1067 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1067-137 5' similar to SW:ACTB_SOLTU P30171 ACTIN 97, mRNA sequence.
BF066640.1:6-29
TGAAA6ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
sai97h07.y1 Gm-c1065 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1065-9181 5' similar to SW:ACTB_SOLTU P30171 ACTIN 97, mRNA sequence.
BI974205.1:100-123
GGTCGTGACCTCACAGATTTCTTGATGAAA100ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
sap65d01.y1 Gm-c1087 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1087-5522 5' similar to SW:ACTB_SOLTU P30171 ACTIN 97, mRNA sequence.
BQ611793.1:36-59
TGCCGAATTCGGCACGAGTTCTTGATGAAA36ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
sar96g09.y1 Gm-c1074 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1074-10313 5' similar to SW:ACTB_SOLTU P30171 ACTIN 97, mRNA sequence.
BU762086.1:343-366
GGTCGTGACCTCACAGATTTCTTGATGAAA343ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
gmrhRww24-05-T7_D02_1_010 Soybean root hair subtracted cDNA library gmrhRww24 Glycine max cDNA, mRNA sequence.
CF921952.1:131-154
GGTCGTGACCTCACAGATTTCTTGATGAAA131ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
Glycine max cDNA, clone: GMFL02-07-F02, 5'end.
DB957723.1:298-321
GGTCGTGACCTCACAGATTTCTTGATGAAA298ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
Glycine max cDNA, clone: GMFL02-15-D09, 5'end.
DB960529.1:298-321
GGTCGTGACCTCACAGATTTCTTGATGAAA298ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
JC5_D04i Forward JC Glycine max cDNA 5', mRNA sequence.
DW246853.1:133-156
GGTCGTGACCTCACAGATTTCTTGATGAAA133ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
Sl_SlB_07K11_T7 SLB Selaginella lepidophylla cDNA clone Sl_SlB_07K11 5' similar to UniRef90_P10987 Actin-5C related cluster. Score = 406 bits (1043), Expect = e-112, mRNA sequence.
EH092513.1:598-621
GGACGTGACTTGACTGACTACCTCATGAAG598ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACCGCCG
JGI_ACBU2806.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU2806 5', mRNA sequence.
EH258961.1:660-683
GGTCGTGACCTCACAGATTTCTTGATGAAA660ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAA
JGI_ACBU5780.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU5780 5', mRNA sequence.
EH261658.1:641-664
GGTCGTGACCTCACAGATTTCTTGATGAAA641ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
GLNAZ26TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV280949.1:680-703
GGTCGTGACCTCACAGATTTCTTGATGAAA680ATCTTGACTGAGCGTGGTTATTCCTTCACCACC
GLNBE73TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV282280.1:680-703
GGTCGTGACCTCACAGATTTCTTGATGAAA680ATCTTGACTGAGCGTGGTTATTCCTTCACCGCCTCAGCCGAGCGGGAAATTGT
Hops-Column-30R_2007-06-15/Hops-Column-30R_H02_001_1 Humulus lupulus (L. cultivar Phoenix) Trichome isolated from the female flower at mid-developmental stage Humulus lupulus cDNA, mRNA sequence.
EX515746.1:705-728
GGTCGTGACCTGACTGATGCCCTTATGAAA705ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACAGCTGANCGTGAAATTGTA
Hops-CTAB-30_2007-06-07/Hops_CTAB-30R_H02_001_1 Humulus lupulus (L. cultivar Phoenix) Trichome isolated from the female flower at mid-developmental stage Humulus lupulus cDNA, mRNA sequence.
EX518604.1:702-725
NGTCGTGACCTGACTGATGCCCTTATGAAA702ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACANCTGANCGTGAAATTGTA
EST m4f08 - [Humulus lupulus] Humulus lupulus Male-Hermaphrodite differential cDNA Humulus lupulus cDNA clone m4f08, mRNA sequence.
FG346768.1:133-156
GGTCGTGACCTGACTGATGCCCGTATGAAA133ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTA
GLPA335TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG998102.1:132-155
GGTCGTGACCTCACAGATTTCTTGATGAAA132ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
GLNDJ10TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK020165.1:680-703
GGTCGTGACCTCACAGATTTCTTGATGAAA680ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
CCOY6378.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) Avena barbata cDNA clone CCOY6378 5', mRNA sequence.
GR365005.1:600-623
GGTCGTGACTTGACTGACTACCTGATGAAG600ATCTTGACTGAGCGTGGTTATTCCTTCACAACCACCGCTGAACGCGAAATTGTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp278838_c1_seq8.
LA385571.1:957-980
GGTCGTGACCTGACTGATGCCCTTATGAAA957ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp278838_c1_seq12.
LA385575.1:957-980
GGTCGTGACCTGACTGATGCCCTTATGAAA957ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp278838_c1_seq13.
LA385576.1:613-636
GGTCGTGACCTGACTGATGCCCTTATGAAA613ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp278838_c1_seq15.
LA385578.1:613-636
GGTCGTGACCTGACTGATGCCCTTATGAAA613ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTA
Glycine max cDNA, clone: GMFL01-17-C16.
AK285830.1:679-702
GGTCGTGACCTCACAGATTTCTTGATGAAA679ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
Soybean clone JCVI-FLGm-25L8 unknown mRNA.
BT096909.1:680-703
GGTCGTGACCTCACAGATTTCTTGATGAAA680ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
Glycine max cultivar Williams 82 chromosome 18.
CP126443.1:59706180-59706203
GGTCGTGACCTCACAGATTTCTTGATGAAA59706180ATCTTGACTGAGCGTGGTTATTCCTTCACCACCTCAGCCGAGCGGGAAATTGTA
Eperua grandiflora clone Act-Eg3 actin-like protein (Act) gene, partial cds.
GU385994.1:328-351
GGACGTGACCTCACTGATGCCCTGATGAAA328ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACGGCTGAGCGTGAAATTGTG
Humulus lupulus genome assembly, chromosome: 7.
OY720654.1:29872162-29872185
GGTCGTGACCTGACTGATGCCCTTATGAAA29872162ATCTTGACTGAGCGTGGTTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTA
EST sm4d02 - [Humulus lupulus] Humulus lupulus Male-Hermaphrodite differential cDNA Humulus lupulus cDNA clone sm4d02, mRNA sequence.
FG355975.1:413-436
TACAATTTCACGCTCAGCTGTGGTGGTGAA413GGAATAACCACGCTCAGTCAAGATTTTCATAAGGGCATCAGTCAGGTCACGACC
CCOY6378.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) Avena barbata cDNA clone CCOY6378 3', mRNA sequence.
GR365006.1:638-661
GACAATTTCGCGTTCAGCGGTGGTTGTGAA638GGAATAACCACGCTCAGTCAAGATCTTCATCAGGTAGTCAGTCAAGTCACGACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATCTTGACTGAGCGTGGTTATTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATCTTGACTGAGCGTGGTTATTCC | format : html | download : | debug : 

0.012 | 0.012 | search_start;
1.518 | 1.506 | search_plus_done; http://172.18.8.135:50400/match?q=ATCTTGACTGAGCGTGGTTATTCC&k=0&no_gap=0&offset=0&limit=50
1.791 | 0.273 | search_minus_done; http://172.18.8.135:50400/match?q=GGAATAACCACGCTCAGTCAAGAT&k=0&no_gap=0&offset=0&limit=16
1.792 | 0.002 | cgi_end;

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