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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:40:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Bufo bufo genome assembly, chromosome: 9.
LR991675.1:79901798-79901817
GCTAAGAGGCCATCACGGCCATCTTGGTTG79901798ATGAAAACGTGCCAAATGTCTCACGTGCTGACTTGTGACGTCACCACATC
Sequence 6 from Patent WO2014080034.
JC528716.1:1-20
1ATGAAAACGTGCCAAATGTC
AGN_RPC018xl14f1.ab1 AGN_RPC Nicotiana tabacum cDNA 5', mRNA sequence.
FG143790.1:280-299
ATGCCAATGAAAGCAAAATTGGTAAGTTCG280ATGAAAACGTGCCAAATGTCCTAGAAAATGCAAATGAAAGCAAAATTGAA
AGN_RNC003xm14f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence.
FG169655.1:405-424
ATGCCAATGAAAGCAAAATTGGTAAGTTCG405ATGAAAACGTGCCAAATGTCCTAGAAAATGCAAATGAAAGCAAAATTGAA
AGN_RNC128xl12f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence.
FG172457.1:139-158
ATGCCAATGAAAGCAAAATTGGTAAGTTCG139ATGAAAACGTGCCAAATGTCCTAGAAAATGCAAATGAAAGCAAAATTGAA
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:151561422-151561441
GTGAGGCACGATATTTTGACTAAATAACGA151561422ATGAAAACGTGCCAAATGTCACTGAGGGCCCCAAAAAGTTTTTAATAAAA
Limnephilus rhombicus genome assembly, chromosome: 22.
OV815292.1:20089386-20089405
ATAGATGATAGAAACGAAGGGAGATATGGC20089386ATGAAAACGTGCCAAATGTCGCCGAGCTACGATCAAACTACATGGACTAT
Tromatobia lineatoria genome assembly, chromosome: 7.
OX453040.1:7826668-7826687
TTCATTTGCCATATCGAAGACTTAAAAAAA7826668ATGAAAACGTGCCAAATGTCTTGAAGGACAAGTCGGTAATTCCTAACGCG
Denticeps clupeoides genome assembly, chromosome: 10.
LR535822.1:5050814-5050833
AGAGAGCTGCATGGTGCAGGGATTCCAAGG5050814GACATTTGGCACGTTTTCATCACACTTGGTCATCTGCTGCCTTTCACTGC
TSA: Nicotiana benthamiana isotig06705.Nb_root mRNA sequence.
KA753410.1:89-108
TTCAATTTTGCCTTCATTTGCATTTTCTAG89GACATTTGGCACGTTTTCATCGAACTTACCAATTTTGCTTTCATTGGCAT
Phoenix dactylifera microsatellite DNA, clone CIR016.
AJ571675.1:148-167
ATGAAAGGGGAGAGTGAGATGCATTTGACT148GACATTTGGCACGTTTTCATGCATGTGATGTTGTATGGACGATTGGGATT
Incurvaria masculella genome assembly, chromosome: 2.
OX335642.1:24963919-24963938
AGACCAATAAGGTTTCGCTAATAACACTCA24963919GACATTTGGCACGTTTTCATTCTTAAGTAACATTAGAATCACTCTCGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGAAAACGTGCCAAATGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAAAACGTGCCAAATGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.378 | 0.370 | search_plus_done; http://172.18.8.135:50400/match?q=ATGAAAACGTGCCAAATGTC&k=0&no_gap=0&offset=0&limit=50
0.433 | 0.055 | search_minus_done; http://172.18.8.135:50400/match?q=GACATTTGGCACGTTTTCAT&k=0&no_gap=0&offset=0&limit=42
0.436 | 0.003 | cgi_end;

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