GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:37:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:55941073-55941092
GAATGAAGAGTTGGAAGGATTATAGAGGCT55941073ATGAACTCGGCACTCTGCATCAAAGAACAGCAAAGCAATATTGAGATTCA
Brassica napus genome assembly, chromosome: C06.
HG994370.1:49896406-49896425
GAATGAAGAGTTGGAAGGATTATAGAGGCT49896406ATGAACTCGGCACTCTGCATCAAAGAACAGCAAAGCAATATTGAGATTCA
Brassica oleracea HDEM genome, scaffold: C6.
LR031880.1:46202654-46202673
GAATGAAGAGTTGGAAGGATTATAGAGGCT46202654ATGAACTCGGCACTCTGCATCAAAGAACAGCAAAGCAATATTGAGATTCA
Lacanobia wlatinum genome assembly, chromosome: 28.
OX388050.1:3312368-3312387
AGAGCTCAGAGAGTGATGTAACTGGCCTGA3312368ATGAACTCGGCACTCTGCATCAGCGGATCAACTAGGTAACTAAATTTAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGAACTCGGCACTCTGCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAACTCGGCACTCTGCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=ATGAACTCGGCACTCTGCAT&k=0&no_gap=0&offset=0&limit=50
0.128 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCAGAGTGCCGAGTTCAT&k=0&no_gap=0&offset=0&limit=46
0.128 | 0.000 | cgi_end;

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