GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-18 18:34:54, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Thalassophryne amazonica genome assembly, chromosome: 9.
LR722974.1:56192470-56192489
TGATAAACTCAGTGTACATCGACAGGAGCC56192470ATGAATCCTCCTCCCAGAGCGCTGTAGCCCAGGTGCGTGCCTTGCCCCGA
Scolopax rusticola genome assembly, chromosome: 46.
OZ199683.1:1091100-1091119
AGCTGAGAGGCCTCCAGACCCCCTGAGAAC1091100ATGAATCCTCCTCCCAGAGCTCCATCTTCAACCGGGGCCAGTCCCTGGAG
Thalpophila matura genome assembly, chromosome: Z.
OX419176.1:3374627-3374646
ATTCTCGCTTCCAGCTGACTTTTGGGAAGA3374627GCTCTGGGAGGAGGATTCATTTGACATCTTCAAATCCTGTTTACAACAAA
Numenius arquata genome assembly, chromosome: 33.
OZ067275.1:275514-275533
CACCAGGGACTGGCCCCAGTTGAAGATGGG275514GCTCTGGGAGGAGGATTCATGCTCTCAGGGGGTCTGGAGACCTCTCAGCT
Triturus cristatus genome assembly, chromosome: 12.
OZ123763.1:215896988-215897007
AAATAAAATTGACAAAAAACAATGAAATAG215896988GCTCTGGGAGGAGGATTCATCACAAGGGCATATTAAAATTTTAGTTGGAT
Lymnocryptes minimus genome assembly, chromosome: 41.
OZ199728.1:800051-800070
CACCGGGGACTGGCCCCGGTTGAAGAGGGG800051GCTCTGGGAGGAGGATTCATGCCCTCAGGGGGCCCAGAGACCTCTCAGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGAATCCTCCTCCCAGAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAATCCTCCTCCCAGAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50800/match?q=ATGAATCCTCCTCCCAGAGC&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.016 | search_minus_done; http://172.18.8.135:50800/match?q=GCTCTGGGAGGAGGATTCAT&k=0&no_gap=0&offset=0&limit=48
0.113 | 0.003 | cgi_end;

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