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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:26:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum melongena mRNA, clone: AE002A11, 5'end, expressed in ovary at anthesis.
FS000607.1:445-464
GCGGTGGTTATGGTGGAGGTGACCGTTACA445ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: AE503O19, 5'end, expressed in ovary at 5d post-anthesis.
FS005628.1:503-522
GCGGTGGTTATGGTGGAGGTGACCGTTACA503ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: CHX03C18, 5'end, expressed in ovary at 24h after anthesis.
FS012808.1:384-403
GCGGTGGTTATGGTGGAGGTGACCGTTACA384ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGAGGTGCTTCCGAT
Solanum melongena mRNA, clone: CHX03E10, 5'end, expressed in ovary at 24h after anthesis.
FS012883.1:42-61
GTAGCCGCGGATACGGTGGTGACCGTTACA42ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGAGGTGCTTCCGAT
Solanum melongena mRNA, clone: CPA02L02, 5'end, expressed in ovary at 24h after anthesis.
FS015727.1:291-310
GCGGTGGTTATGGTGGAGGTGACCGTTACA291ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: PED04G24, 5'end, expressed in peduncle at anthesis.
FS035382.1:350-369
GCGGTGGTTATGGTGGAGGTGACCGTTACA350ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: PED06G13, 5'end, expressed in peduncle at anthesis.
FS036634.1:57-76
GCGGTGGTTATGGTGGAGGTGACCGTTACA57ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: RBW07K08, 5'end, expressed in root at 3w after germination.
FS052932.1:388-407
GCGGTGGTTATGGTGGAGGTGACCGTTACA388ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGAGGTGCTTCCGAT
Solanum melongena mRNA, clone: ROL02L14, 5'end, expressed in root at 3w after germination.
FS053892.1:504-523
GCGGTGGTTATGGTGGAGGTGACCGTTACA504ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGAGG
Solanum melongena mRNA, clone: SmFL10N02, 5'end.
FS073362.1:503-522
GCGGTGGTTATGGTGGAGGTGACCGTTACA503ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: SmFL31K17, 5'end.
FS087793.1:503-522
GCGGTGGTTATGGTGGAGGTGACCGTTACA503ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: SmFL34F13, 5'end.
FS089701.1:363-382
GCGGTGGTTATGGTGGAGGTGACCGTTACA363ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGTGGTGCTTCCGAT
Solanum melongena mRNA, clone: SmFL36L02, 5'end.
FS091350.1:503-522
GCGGTGGTTATGGTGGAGGTGACCGTTACA503ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGAGGTGCTTCCGA
Solanum melongena mRNA, clone: SmFL37K04, 5'end.
FS092014.1:503-522
GCGGTGGTTATGGTGGAGGTGACCGTTACA503ATGACGGTGGATCTCGCTACTCAAGAGGTGGTGGTGGAGGTGCTTCCGA
Vicia faba genome assembly, chromosome: 1L.
OX451736.1:806702103-806702122
CTAGGTGGCTAAAAGATAAGTTAAACGATG806702103ATGACGGTGGATCTCGCTACGAGGCTTTATGGAAGCTTAAGCTTCATCGT
Solanum melongena mRNA, clone: AE001E09, 3'end, expressed in ovary at anthesis.
FS000155.1:241-260
ATCGGAAGCACCACCACCACCACCTCTTGA241GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: AE002A11, 3'end, expressed in ovary at anthesis.
FS000608.1:244-263
ATCGGAAGCACCACCACCACCACCTCTTGA244GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: AE004E24, 3'end, expressed in ovary at anthesis.
FS001964.1:357-376
ATCGGAAGCACCACCACCACCACCTCTTGA357GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: AE502M23, 3'end, expressed in ovary at 5d post-anthesis.
FS004909.1:253-272
ATCGGAAGCACCACCACCACCACCTCTTGA253GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: AE503M12, 3'end, expressed in ovary at 5d post-anthesis.
FS005549.1:239-258
ATCGGAAGCACCACCACCACCACCTCTTGA239GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: AE507D01, 3'end, expressed in ovary at 5d post-anthesis.
FS007581.1:244-263
TCCATCGGAAGCACCACCACCACCTCTTGA244GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: CHX03C18, 3'end, expressed in ovary at 24h after anthesis.
FS012809.1:239-258
ATCGGAAGCACCTCCACCACCACCTCTTGA239GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: CHX03E10, 3'end, expressed in ovary at 24h after anthesis.
FS012884.1:253-272
ATCGGAAGCACCTCCACCACCACCTCTTGA253GTAGCGAGATCCACCGTCATTGTAACGGTCACCACCGTATCCGCGGCTAC
Solanum melongena mRNA, clone: CPA01K11, 3'end, expressed in ovary at 24h after anthesis.
FS015097.1:254-273
ATCGGAAGCACCTCCACCACCACCTCTTGA254GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: CPA02H03, 3'end, expressed in ovary at 24h after anthesis.
FS015588.1:240-259
ATCGGAAGCACCTCCACCACCACCTCTTGA240GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: CPA02L02, 3'end, expressed in ovary at 24h after anthesis.
FS015728.1:240-259
ATCGGAAGCACCACCACCACCACCTCTTGA240GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: MLF06E22, 3'end, expressed in leaf at fully expanded leaf.
FS026095.1:253-272
ATCGGAAGCACCACCACCACCACCTCTTGA253GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: OVL01D10, 3'end, expressed in ovary at 2d pre-anthesis.
FS027263.1:194-213
ATCGGAAGCACCACCACCACCACCTCTTGA194GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: OVL04M07, 3'end, expressed in ovary at 2d pre-anthesis.
FS029326.1:259-278
ATCGGAAGCACCACCACCACCACCTCTTGA259GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: PED06G13, 3'end, expressed in peduncle at anthesis.
FS036635.1:252-271
ATCGGAAGCACCACCACCACCACCTCTTGA252GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: PER04B17, 3'end, expressed in pericarp at 10d after anthesis.
FS039535.1:242-261
ATCGGAAGCACCACCACCACCACCTCTTGA242GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: RBW06O03, 3'end, expressed in root at 3w after germination.
FS052518.1:241-260
ATCGGAAGCACCTCCACCACCACCTCTTGA241GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: RBW07K08, 3'end, expressed in root at 3w after germination.
FS052933.1:205-224
ATCGGAAGCACCTCCACCACCACCTCTTGA205GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: ROL04B08, 3'end, expressed in root at 3w after germination.
FS054502.1:241-260
ATCGGAAGCACCTCCACCACCACCTCTTGA241GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: SmFL10N02, 3'end.
FS073363.1:249-268
ATCGGAAGCACCACCACCACCACCTCTTGA249GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: SmFL31K17, 3'end.
FS087794.1:249-268
ATCGGAAGCACCACCACCACCACCTCTTGA249GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: SmFL34F13, 3'end.
FS089702.1:249-268
ATCGGAAGCACCACCACCACCACCTCTTGA249GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: SmFL36L02, 3'end.
FS091351.1:252-271
ATCGGAAGCACCTCCACCACCACCTCTTGA252GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum melongena mRNA, clone: SmFL37K04, 3'end.
FS092015.1:249-268
ATCGGAAGCACCTCCACCACCACCTCTTGA249GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCACCATAACCACCGC
Solanum dulcamara genome assembly, chromosome: 4.
OX359255.1:2412420-2412439
GGAAGCACCACCGCCACCACCACCTCTAGA2412420GTAGCGAGATCCACCGTCATTGTAACGGTCACCTCCTCCATAACCACCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGACGGTGGATCTCGCTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGACGGTGGATCTCGCTAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.400 | 1.392 | search_plus_done; http://172.18.8.135:50400/match?q=ATGACGGTGGATCTCGCTAC&k=0&no_gap=0&offset=0&limit=50
3.915 | 2.515 | search_minus_done; http://172.18.8.135:50400/match?q=GTAGCGAGATCCACCGTCAT&k=0&no_gap=0&offset=0&limit=35
3.931 | 0.016 | cgi_end;

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