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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-10 18:25:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sarcophilus harrisii genome assembly, chromosome: 3.
LR735556.1:300294827-300294846
AATAAGATTTGACAATTGATCGAGGGAAGA300294827ATGAGAATGTGAAAATCAAGGATGATGACTAGGGCACTAGTGTGGGTAAC
Astatotilapia calliptera genome assembly, chromosome: 7.
LS420025.2:9632879-9632898
TAAAATAAGGCGCGAGCGAGAGTCACGAAG9632879ATGAGAATGTGAAAATCAAGTTAAAGAAACATTGAGCTCTGCTAGTTCAG
GQ0068.B3_C12 GQ006: Cambium and phloem from mature trees Picea glauca cDNA clone GQ0068_C12 5', mRNA sequence.
DV975435.2:497-516
TAAAATGGTGGGAAGGAATAAGTTGGGAGA497ATGAGAATGTGAAAATCAAGCTTTCTCAATTTTTTAGGCAAGAGGAAGAT
Picea glauca clone GQ0068_C12 mRNA sequence.
BT101123.1:497-516
TAAAATGGTGGGAAGGAATAAGTTGGGAGA497ATGAGAATGTGAAAATCAAGCTTTCTCAATTTTTTAGGCAAGAGGAAGAT
Picea glauca clone GQ03319_F17 mRNA sequence.
BT112679.1:1142-1161
TAGAATGGTGGAAAGGAATAAGTTGGGAGA1142ATGAGAATGTGAAAATCAAGTTTTTTCAACTTTTTAGGCAAAAGGGGTTT
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141912.1:28157886-28157905
CAGAGTCAACGACATAGGTAAACCTAGTTA28157886ATGAGAATGTGAAAATCAAGCATCCATGACATAGGTAAACCTCATATGTT
Spirodela intermedia genome assembly, chromosome: 5.
LR743592.1:2519175-2519194
TTTCCAAAAATGAAATTGAGAAACTTTTAC2519175ATGAGAATGTGAAAATCAAGTACCATTGAAACTTTGTCAAGTCCATATGT
Ceutorhynchus assimilis genome assembly, chromosome: 9.
OU892285.1:9381662-9381681
CGAAATCTTTTACCACATTGCCTCTTGAAT9381662ATGAGAATGTGAAAATCAAGTACGATGGGACAAGTAAACTTTTAACCGTG
Ceutorhynchus assimilis genome assembly, chromosome: 9.
OU892285.1:9468345-9468364
CGAAATCTTTTACCACATTGCCTCTTGAAT9468345ATGAGAATGTGAAAATCAAGTACGATGGGACAAGTAAACTTTTAACCGTG
Ceutorhynchus assimilis genome assembly, chromosome: 9.
OU892285.1:9533995-9534014
CGAAATCTTTTACCACATTGCCTCTTGAAT9533995ATGAGAATGTGAAAATCAAGTACGATGGGACAAGTAAACTTTTAACCGTG
Ceutorhynchus assimilis genome assembly, chromosome: 9.
OU892285.1:9633104-9633123
CGAAATCTTTTACCACATTGCCTCTTGAAT9633104ATGAGAATGTGAAAATCAAGTACGATGGGACAAGTAAACTTTTAACCGTG
Sepioteuthis lessoniana genome assembly, chromosome: 7.
OY757910.1:99269287-99269306
TATATATATATATATATATATACTAGTAAA99269287ATGAGAATGTGAAAATCAAGTTTTTGAAAACTGGAATTTAAACATCTAAA
Scyliorhinus canicula genome assembly, chromosome: 15.
LR744044.1:10401692-10401711
GGCCTACATAGGCTCCTGGTTAAATAACGC10401692CTTGATTTTCACATTCTCATTCTTGTTTGCTAGCTCTTCCAGGTCTCATC
Acipenser ruthenus genome assembly, chromosome: 6.
OV737687.1:76902313-76902332
ATAATTCTTCCACATACTGGTAATCTGTGC76902313CTTGATTTTCACATTCTCATCTTTAATACATCCCTGCTGAGTTTCTGGCT
Acipenser ruthenus genome assembly, chromosome: 6.
OV754675.1:76150221-76150240
ATAATTCTTCCACATACTGGTAATCTGTGC76150221CTTGATTTTCACATTCTCATCTTTAATACATCCCTGCTGAGTTTCTGGCT
GQ0252.B7_J07 GQ025: Annual flush SHOOTS diurnal cycle- trees Picea glauca cDNA clone GQ0252_J07 3', mRNA sequence.
CO487607.2:122-141
TTCTTCTTCTTCCCTAAAAAATTGAGAAAG122CTTGATTTTCACATTCTCATTCTCCCAACTTATTCCTTCCCACCATTTTA
GQ0068.TB_C12 GQ006: Cambium and phloem from mature trees Picea glauca cDNA clone GQ0068_C12 3', mRNA sequence.
DV976792.2:84-103
ATCTTCCTCTTGCCTAAAAAATTGAGAAAG84CTTGATTTTCACATTCTCATTCTCCCAACTTATTCCTTCCCACCATTTTA
GQ03319.SP6.r_F17 GQ033 - Terminal leader (Normalized library) Picea glauca cDNA clone GQ03319_F17 3', mRNA sequence.
GR222714.1:141-160
AAACCCCTTTTGCCTAAAAAGTTGAAAAAA141CTTGATTTTCACATTCTCATTCTCCCAACTTATTCCTTTCCACCATTCTA
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141955.1:8396513-8396532
AACATATGAGGTTTACCTATGTCATGGATG8396513CTTGATTTTCACATTCTCATTAACTAGGTTTACCTATGTCGTTGACTCTG
Ceutorhynchus assimilis genome assembly, chromosome: 9.
OU892285.1:14202528-14202547
CACGGTTAAAAGTTTACTTGTCCCATCGTA14202528CTTGATTTTCACATTCTCATATTCAAGAGGCAATGTGGTAAAAGATTTCG
Nematostella vectensis genome assembly, chromosome: 3.
OW051987.1:6670496-6670515
CATCCATGAGCAAACTTAGAGCAGCATTTT6670496CTTGATTTTCACATTCTCATTTTGCCCTTAAGATTGACAGGAAGTTTTTC
Lumbricus terrestris genome assembly, chromosome: 8.
OX457043.1:36089718-36089737
TATCATAATCGAAGTGACGTCAGAATAGGC36089718CTTGATTTTCACATTCTCATAATGCACTTCTATAGGCCTAATAGTAAATC
Eurois occulta genome assembly, chromosome: 6.
OX465483.1:19369741-19369760
AAATTAGCAGGACACGTAAATAATAAGGTG19369741CTTGATTTTCACATTCTCATTCTTCACAGCTACATTTTTACGAGTTTTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGAGAATGTGAAAATCAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAGAATGTGAAAATCAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.470 | 0.461 | search_plus_done; http://172.18.8.135:50400/match?q=ATGAGAATGTGAAAATCAAG&k=0&no_gap=0&offset=0&limit=50
1.001 | 0.531 | search_minus_done; http://172.18.8.135:50400/match?q=CTTGATTTTCACATTCTCAT&k=0&no_gap=0&offset=0&limit=38
1.008 | 0.007 | cgi_end;

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