GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 06:05:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CGN-15135 Pericarp Coffea canephora cDNA clone cccp27i4 5', mRNA sequence.
DV677673.1:131-151
CTCTCTCTTCTTCTTCTTCTTCAATGAGCA131ATGAGCATTGAGCAGCACCGCTGAATTCTAATTTCCTAGCCTAGCAGTATA
CGN-35542 Leaf Coffea canephora cDNA clone cccl25f7 5', mRNA sequence.
DV691775.1:32-52
TCTCTCTCTTCTTCTTCTTCTCCTATAAAA32ATGAGCATTGAGCAGCACCGCTGAATTCTAATCCCTCAAACTAGCAGTATA
AFP0AAA7YB08FM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO586988.1:487-507
CTCTCTCTTCTTCTTCTTCTTCAATGAGCA487ATGAGCATTGAGCAGCACCGCTGAATTCTAATTTCCCAGCCTAGCAGTATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGAGCATTGAGCAGCACCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAGCATTGAGCAGCACCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.215 | 0.207 | search_plus_done; http://172.18.8.135:50400/match?q=ATGAGCATTGAGCAGCACCGC&k=0&no_gap=0&offset=0&limit=50
0.231 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GCGGTGCTGCTCAATGCTCAT&k=0&no_gap=0&offset=0&limit=47
0.231 | 0.000 | cgi_end;

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