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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:54:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Epinephelus fuscoguttatus DNA, LG14, complete sequence.
AP022688.1:21169409-21169427
ATTTTTTTCTTAATTTCTTCTTATTAAGAG21169409ATGAGCTAAAGAGAAGAGGCTGAGGTAATCTGAGAAAAATTTAACTGGT
Erpetoichthys calabaricus genome assembly, chromosome: 4.
LR536435.2:291058809-291058827
TGGAATTCTCTTTGGAAAACATGGACACCT291058809ATGAGCTAAAGAGAAGAGGGAGCATCTGGCTAGTGTAGAATTCAAAAGC
Pseudochaenichthys georgianus genome assembly, chromosome: 24.
LR792569.1:24947183-24947201
AATGAGAGGAGAAATGATCTGTGATTCATC24947183ATGAGCTAAAGAGAAGAGGAAGTGCTCCCCCCCCCCCCCCCCCCCCCCT
Poecilia reticulata genome assembly, chromosome: 22.
LR880666.1:9405972-9405990
AAATGTAAAATCATATTGGAAACGTGCGGA9405972ATGAGCTAAAGAGAAGAGGATGTAACGGGACCCAAGGATCTAAATGATC
Vipera ursinii genome assembly, chromosome: 3.
OX365966.1:196583302-196583320
ACAACTGACCACATGGCACACAAGATGCTT196583302ATGAGCTAAAGAGAAGAGGACAAGAAAATCCTGCTCCTGATGTTACCTA
Notothenia rossii genome assembly, chromosome: 8.
OX449118.1:69854280-69854298
AATGAGAGGAGAAATGATCTGTGATTCATC69854280ATGAGCTAAAGAGAAGAGGAAGTGCTTCCCCCCCCCCCCCTCTCGTCTT
Chelon labrosus genome assembly, chromosome: 17.
OY741305.1:23542639-23542657
GCCAGACGGCTGAAAATAATCCGCACATCC23542639ATGAGCTAAAGAGAAGAGGAAAAGATCCTGAGCGATCTGAATGAAAGAA
Valencia hispanica genome assembly, chromosome: 16.
OY747715.1:10142182-10142200
GATGTCATGATTTTGTAGAGGGTAGGAGAG10142182ATGAGCTAAAGAGAAGAGGTATACAGTAGCTGCAGCTCCAGAAGAAGCA
Citrus reticulata microsatellite DNA, locus mCrCIR01F08, allele 01F08-gaat(6).
AM489737.1:18-36
ACGTGATGATAGAATCA18ATGAGCTAAAGAGAAGAGGCCTAGAATGAATGAATGAATGAATGAATGA
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:121312140-121312158
ATTACATGCAAATTGACAAAACTACCCTTA121312140ATGAGCTAAAGAGAAGAGGTGTCTCTTGGATGTTGGAATGTAAAGTGAC
Saccharomyces uvarum strain CBS7001 chromosome V, complete sequence.
CP113768.1:437520-437538
GATCGCGATCTTTGACAGTTGCAGAACTAA437520ATGAGCTAAAGAGAAGAGGTGTTCAACTATAAAGGTATATTGGTAAAAT
Saccharomyces uvarum strain NRRL Y-11845 chromosome V.
CP113960.1:437430-437448
GATCGCGATCTTTGACAGTTGCAGAACTAA437430ATGAGCTAAAGAGAAGAGGTGTTCAACTATAAAGGTATATTGGTAAAAT
Polygonum aviculare genome assembly, chromosome: 7.
OW204029.1:17714285-17714303
AGGACAAGCTAGGATGAAGACTTGAAGTGG17714285ATGAGCTAAAGAGAAGAGGCAAGAGGAGTAAAATCAAGAGGAGAAGTGA
Saccharomyces uvarum strain CBS7001 genome assembly, chromosome: 5.
OX365916.1:416375-416393
GATCGCGATCTTTGACAGTTGCAGAACTAA416375ATGAGCTAAAGAGAAGAGGTGTTCAACTATAAAGGTATATTGGTAAAAT
Saccharomyces uvarum strain ZP964 genome assembly, chromosome: 5.
OX365932.1:414783-414801
GATCGCGATCTTTGACAGTTGCAGAACTAA414783ATGAGCTAAAGAGAAGAGGTGTTCAGCTATAAAGCTATATTGATAAAAG
Citrus sinensis genome assembly, chromosome: 3.
OY754320.1:10889509-10889527
ATTCAGAAACTGTACGTGATGATAGAATCA10889509ATGAGCTAAAGAGAAGAGGCCTAGAATGAATGAATGAATGAATGAATGA
Sympetrum striolatum genome assembly, chromosome: 1.
OX388341.1:88897245-88897263
GTCGACTTTTTCTTTATTTTAAGAATGCAT88897245ATGAGCTAAAGAGAAGAGGAAACAAAATGTGATTCCACTTCTAACCATT
Eupeodes luniger genome assembly, chromosome: 2.
OX608074.1:12541650-12541668
AAAATTTATCTAAAATAAACTTACTTATTT12541650ATGAGCTAAAGAGAAGAGGTTAACAAACAAAACCGTTATAGGAGTTGAT
Furcifer pardalis isolate Fpa_1 chromosome 1.
CP126890.1:297170627-297170645
TGCCAGACCAATTTCATCTGTTCATCCCAT297170627CCTCTTCTCTTTAGCTCATCCATTGTTCAGTCCAGAGAATAAAAGTGTA
Sphaeramia orbicularis genome assembly, chromosome: 19.
LR597476.1:35177021-35177039
TGTTATTCATCTAGCCATCATTACTTATCC35177021CCTCTTCTCTTTAGCTCATGAGTAATAGAGAAAACAGAGCAAGTAAGGA
Telmatherina bonti genome assembly, chromosome: 13.
OW121833.1:32232902-32232920
ATTGAGTCTTAAGAGACCACCCAGGGGTTT32232902CCTCTTCTCTTTAGCTCATAATTGTTCAATTAGACTAAAGGCTGGGGAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:109811462-109811480
GTCACTTTACATTCCAACATCCAAGAGACA109811462CCTCTTCTCTTTAGCTCATTAAGGGTAGTTTTGTCAATTTGCATGTAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:197813385-197813403
TTCACTTTATAATCCAACATCCAAGAAGCG197813385CCTCTTCTCTTTAGCTCATTAAGGGTAGTTTTGTCATTTGGCATGTAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:197820432-197820450
TTCACTTTATAATCCAACATCCAAGAAGCG197820432CCTCTTCTCTTTAGCTCATTAAGGATATTTTTGTCATTTGGCATGTAAT
Narthecium ossifragum genome assembly, chromosome: 4.
OY986966.1:29096951-29096969
CTTGCTTGAGTAGCTGAGCTCTCCATTCTT29096951CCTCTTCTCTTTAGCTCATCACCCCCTTTTTTGCTCAGAACCTTATCTC
Polygonum maritimum genome assembly, chromosome: 3.
OZ002730.1:34433563-34433581
TTCACTTCTCCTCTTGATTTTGCTCTCTTG34433563CCTCTTCTCTTTAGCTCATCCACTTCAAGTCTTCCTCCTAGCTTGTCCT
Polygonum maritimum genome assembly, chromosome: 3.
OZ002730.1:34439820-34439838
TTCACTTCTCCTCTTGATTTTGCTCTCTTG34439820CCTCTTCTCTTTAGCTCATCCACTTCAAGTCTTCCTCCTAGCTTGTCCT
Polygonum maritimum genome assembly, chromosome: 5.
OZ002732.1:7070567-7070585
TCACTTCTTCTCTTGATTTTGCTCCTCTTG7070567CCTCTTCTCTTTAGCTCATCCACTTCAAGTCTTCCTCCTAGCTTGTCCT
Polygonum maritimum genome assembly, chromosome: 10.
OZ002737.1:21617453-21617471
TCACTTTTCCTCTTGATTTTTTTCCTCTTG21617453CCTCTTCTCTTTAGCTCATCCACTTCAAGTCTTCCTCCGAGTTGGTCCT
Eupeodes corollae genome assembly, chromosome: 2.
OX244024.1:144253415-144253433
ATCAACTCCTATAACGGTTTTGTTTGTTAA144253415CCTCTTCTCTTTAGCTCATAAATAAGTAAGTTTATTTTAGATAAATTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGAGCTAAAGAGAAGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAGCTAAAGAGAAGAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.243 | 0.235 | search_plus_done; http://172.18.8.135:50400/match?q=ATGAGCTAAAGAGAAGAGG&k=0&no_gap=0&offset=0&limit=50
0.375 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCTTCTCTTTAGCTCAT&k=0&no_gap=0&offset=0&limit=32
0.383 | 0.008 | cgi_end;

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