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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:01:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Arvicola amphibius genome assembly, chromosome: 5.
LR862384.1:75723359-75723378
GAACATGATCATTTTCTTTATCAATGACTA75723359ATGAGTGAAGAACCTGCACACTGTGGAGGGCACCAAATGCAGAAAGGTGA
Gouania willdenowi genome assembly, chromosome: 6.
LR132000.1:7923617-7923636
ACCTGCTCGATGTCACACATTATCATTATG7923617ATGAGTGAAGAACCTGCACAGGCTGGTGAAGGAGAACCATTCTGATTCTA
GH_RMIRS_012_C01_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA sequence.
DW478080.1:291-310
CGTCATCAGCTATCAGGACAGGAGGACCGG291ATGAGTGAAGAACCTGCACATCGTCATCCTATCTTCGCCTTCATCATCCT
Gossypium turneri isolate D10-2 chromosome D10_01.
CP032571.1:58264196-58264215
CGTCATCAGCTATCAGGACAGGAGGACCGG58264196ATGAGTGAAGAACCTGCACATCGTCATCCTCCTCTCCTTCGTCGTCGTCG
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:123576715-123576734
CGTCATCAGCTATCAGGACAGGAGGACCGG123576715ATGAGTGAAGAACCTGCACATCGTCATCCTCCTCTCCTTCGTCGTCGTCG
Gossypium rotundifolium isolate GPK201 chromosome 1.
CP106722.1:196904070-196904089
CGTCATCAGCTATCAGGACAGGAGGACCGG196904070ATGAGTGAAGAACCTGCACATCGTCATCCTCCTCTCCTTCGTCGTCGTCT
Gossypium herbaceum clone NBRI_C_7997 simple sequence repeat marker, mRNA sequence.
HQ527564.1:232-251
CGTCATCAGCTATCAGGACAGGAGGACCGG232ATGAGTGAAGAACCTGCACATCGTCATCCTCCTCTCCGTCGTCGTCGTCG
Gossypium herbaceum clone NBRI_C2_1045 simple sequence repeat marker, mRNA sequence.
HQ527566.1:7-26
AACCGG7ATGAGTGAAGAACCTGCACATCGTCATCCTCCTCTCCGNTCGTCGTCGTC
Sequence 17646 from patent US 7557201.
GP486649.1:18-37
GCAGAGTAGGATGACGA18TGTGCAGGTTCTTCACTCATGCGGTCCTTCTGTCCTGATAGCTGATGACG
GR__Ea13O21.r GR__Ea Gossypium raimondii cDNA clone GR__Ea13O21 3', mRNA sequence.
CO092723.1:71-90
CGACGACGACGAAGGACAGGAGGATGACGA71TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
GR__Eb31N01.r GR__Eb Gossypium raimondii cDNA clone GR__Eb31N01 3', mRNA sequence.
CO130189.1:289-308
CGACGACGACGAAGGAGAGGAGGATGACGA289TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
g080h08a Gossypium hirsutum 5-25 dpa fiber library Gossypium hirsutum cDNA, mRNA sequence.
DR044172.1:276-295
ACGACGACGACAAGGAGAGGAGGATGACGA276TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
g025h03a Gossypium hirsutum 5-25 dpa fiber library Gossypium hirsutum cDNA, mRNA sequence.
DR044179.1:78-97
GACGACGACNACAAGAGAGGAGGATGACGA78TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
EST1073311 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT562671.1:216-235
CGACGACGACGAAGGAGAGGAGGATGACGA216TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
GH_HYPT_01-01-08R_C01_InvR_21Apr04_011_F Stem - 3 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW225411.1:3-22
GA3TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
GH_HYPT_01-01-30R_C06_InvR_29Apr04_044_F Stem - 3 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW227132.1:193-212
GGAAGACGACGAAGGAGAGGTGGATGACGA193TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
GH_RMIRS_012_C01_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA sequence.
DW478079.1:249-268
GAAGGCGAAGATAGGAGAGGAGGATGACGA249TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
UFL_190_39 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES830252.1:336-355
CGACGACGACGAAGGAGAGGAGGATGACGA336TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
EST004189 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 16-M16 5', mRNA sequence.
GR710989.1:253-272
CGACGACGACGAAGGAGAGGAGGATGACGA253TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
mhczaa0_025072.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_025072.z1, mRNA sequence.
JG839143.1:394-413
CGACGACGACGACGGAGAGGAGGATGACGA394TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
mhczaa0_016416.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_016416.z1, mRNA sequence.
JG844303.1:395-414
CGACGACGACGACGGAGAGGAGGATGACGA395TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
D10-102D10 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK790789.1:277-296
CGACGACGACGAAGGAGAGGAGGATGACGA277TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
A01-028A1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK791359.1:274-293
CGACGACGACGAAGGAGAGGAGGATGACGA274TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
C09-115C09 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK791384.1:276-295
CGACGACGACGAAGGAGAGGAGGATGACGA276TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
E09-105D07 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK791596.1:276-295
CGACGACGACGAAGGAGAGGAGGATGACGA276TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
F08-079F8 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK792529.1:179-198
CGACGACGACGAAGGAGAGGAGGATGACGA179TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
D01-093D01 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK792737.1:274-293
CGACGACGACGAAGGAGAGGAGGATGACGA274TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
C08-008-C8 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK793013.1:278-297
CGACGACGACGAAGGAGAGGAGGATGACGA278TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
B09-104B09 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK793119.1:276-295
CGACGACGACGAAGGAGAGGAGGATGACGA276TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
C09-4-C9 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK793231.1:24-43
GACGAAGGAGAGGAGGATGACGA24TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
F05-4-F5 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK793961.1:200-219
CGACGACGACGAAGGAGAGGAGGATGACGA200TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
H10-54H10 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794784.1:200-219
CGACGACGACGAAGGAGAGGAGGATGACGA200TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
D01-108D01 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794803.1:279-298
CGACGACGACGAAGGAGAGGAGGATGACGA279TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
G01-114G01 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK795598.1:271-290
CGACGACGACGAAGGAGAGGAGGATGACGA271TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
D07-105D07 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK795728.1:275-294
CGACGACGACGAAGGAGAGGAGGATGACGA275TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
E01-043G04 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK796012.1:184-203
CGACGACGACGAAGGAGAGGAGGATGACGA184TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
F12-23-F12 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK796223.1:282-301
CGACGACGACGAAGGAGAGGAGGATGACGA282TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
G05-071G5 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK796488.1:276-295
CGACGACGACGAAGGAGAGGAGGATGACGA276TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
A10-104A10 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK797796.1:273-292
CGACGACGACGAAGGAGAGGAGGATGACGA273TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
A07-109A07 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK800016.1:179-198
CGACGACGACGAAGGAGAGGAGGATGACGA179TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
G01-75G01 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK801013.1:273-292
CGACGACGACGAAGGAGAGGAGGATGACGA273TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
G01-76G01 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK801070.1:277-296
CGACGACGACGAAGGAGAGGAGGATGACGA277TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
ndcxa0_0009_F11.ab1 Upland cotton seedling roots at 48h control (ndcxa) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ369093.1:268-287
CGACGACGACGAAGGAGAGGAGGACGACGA268TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
ndcxa0_0010_D10.ab1 Upland cotton seedling roots at 48h control (ndcxa) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ369145.1:333-352
CGACGACGACGAAGGAGAGGAGGATGACGA333TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
ndcxa0_0032_A04.ab1 Upland cotton seedling roots at 48h control (ndcxa) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ370826.1:271-290
CGACGACGACGAAGGAGAGGAGGATGACGA271TGTGCAGGTTCTTCACTCATCCGGTCCCCCTGTCCTGATAGCTGATGACG
ndcxe0_0031_E10.ab1 Upland cotton seedling roots at 3h control (ndcxe) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ382166.1:274-293
CGACGACGACGAAGGAGAGGAGGATGACGA274TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
Gossypium raimondii isolate D5-4 chromosome D5_01.
CP032553.1:2334956-2334975
CGACGACGACGAAGGAGAGGAGGATGACGA2334956TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
Gossypium herbaceum isolate GPA1alz chromosome 1.
CP106699.1:2311601-2311620
CGACGACGACGAAGGAGAGGAGGATGACGA2311601TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
Gossypium bickii isolate GPG1lz chromosome 1.
CP106715.1:3271554-3271573
CGACGACGACGAAGGAGAGGAGGATGACGA3271554TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG
UNVERIFIED: Gossypium hirsutum isolate GFL073 mRNA sequence, sequence.
MW082292.1:659-678
CGACGACGACGAAGGAGAGGAGGATGACGA659TGTGCAGGTTCTTCACTCATCCGGTCCTCCTGTCCTGATAGCTGATGACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGAGTGAAGAACCTGCACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGAGTGAAGAACCTGCACA | format : html | download : | debug : 

0.015 | 0.015 | search_start;
0.243 | 0.228 | search_plus_done; http://172.18.8.135:50400/match?q=ATGAGTGAAGAACCTGCACA&k=0&no_gap=0&offset=0&limit=50
4.030 | 3.788 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGCAGGTTCTTCACTCAT&k=0&no_gap=0&offset=0&limit=42
4.062 | 0.032 | cgi_end;

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