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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 09:03:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vicia faba genome assembly, chromosome: 1S.
OX451735.1:4300660-4300679
CCATCAGATCCTCACATCTCTGAGTCATCA4300660ATGATCTGAAGCAAGCAGCATGCAAGATTCTAGATTTGAAGCGTTACTTT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38477417-38477436
GAAACTTGCACCGTTGCACAAATATTGGGC38477417ATGATCTGAAGCAAGCAGCAGTTACATGGAAACCTGTCAGGTCATGAGGG
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737503.1:112506815-112506834
GAAATGTATGCAAACTTCAGAAGGCCATTT112506815ATGATCTGAAGCAAGCAGCAAGGAGCTGGAACATTCGTTTTGATGAAGTG
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737654.1:113357590-113357609
GAAATGTATGCAAACTTCAGAAGGCCATTT113357590ATGATCTGAAGCAAGCAGCAAGGAGCTGGAACATTCGTTTTGATGAAGTG
Sepioteuthis lessoniana genome assembly, chromosome: 39.
OY757942.1:26743561-26743580
AGATACAAGCCTAAGTCAAATCCCTGCTGC26743561ATGATCTGAAGCAAGCAGCAGGAGGCATTGGCTTATATGTGAATGTAAAT
Acipenser ruthenus genome assembly, chromosome: 6.
OV737687.1:2669259-2669278
TGCATTGGCTGTGGATAGCCATGCAGTTTC2669259TGCTGCTTGCTTCAGATCATTTTCACTGCGCTCCCTGGGGGGGTGTGTGT
Acipenser ruthenus genome assembly, chromosome: 6.
OV754675.1:2611205-2611224
TGCATTGGCTGTGGATAGCCATGCAGTTTC2611205TGCTGCTTGCTTCAGATCATTTTCACTGCGCTCCCTGGGGGGGTGTGTGT
GH_MBb0058E20r GH_MBb Gossypium hirsutum genomic clone GH_MBb0058E20r, genomic survey sequence.
DX523638.1:1108-1127
TATGACTACTTTCTCTCTGTCTATGTTTCA1108TGCTGCTTGCTTCAGATCATTTTTTTTTGGCTTGTGTGTCTTCAGTCTTC
Rattus norvegicus clone CH230-40H22, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC109008.4:126773-126792
TTTTGTATGAATATATATTAAAGGATCTAG126773TGCTGCTTGCTTCAGATCATGACAATGATGGGCAGAGGAGACATAACCCA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2573338-2573357
CTCTCATGACCTGACAGACTTCCATGTAAC2573338TGCTGCTTGCTTCAGATCATGTCCGATATTCGTGCAACGGTGCAAGTTTC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2617533-2617552
CCCTCATGACCTGACAGATTTCCACGTAAC2617533TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2658238-2658257
CCCTCATGACCTGACAGACTTCCATGTAAC2658238TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2697435-2697454
CCCTCATGACCTGACAGGCTTCCATGTAAC2697435TGCTGCTTGCTTCAGATCATGCCCAATATTTGTGCAACGGTGCAAGTTTC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2731345-2731364
CCCTCATGACCTGACAGACTTCCATGTAAC2731345TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2650803-2650822
TCATGACCTGACAGACTTCCACCGCGTAAC2650803TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2704840-2704859
CCCTCATGACCTGACAGGCTTCCATGTAAC2704840TGCTGCTTGCTTCAGATCATGCCCAATATTTGTGCAACGGTGCAAGTTTC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2637954-2637973
CCCTCATGACCTGACAGACTTCCATGTAAC2637954TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGTAAGTTTC
Malus domestica Starking Delicious DNA, BAC clone SD-178_L15, complete sequence.
LC360748.1:44060-44079
CCCTTATGACTTGACAGGCTTCCATGTAAC44060TGCTGCTTGCTTCAGATCATGCCCAATATTCGTGCAACGGTGCAAGTTTC
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2760848-2760867
TCATGACCTGACAGACTTCCACCGCGTAAC2760848TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2812449-2812468
CCCTTATGACTTGACAGGCTTCCATGTAAC2812449TGCTGCTTGCTTCAGATCATGCCCAATATTCGTGCAACGGTGCAAGTTTC
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2749110-2749129
TCATGACCTGACAGACTTCCACCGCGTAAC2749110TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2810312-2810331
CCCTCATGACCTGACAGGCTTCCATGTAAC2810312TGCTGCTTGCTTCAGATCATGCCCAATATTTGTGCAACGGTGCAAGTTTC
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2823767-2823786
TCATGACCTGACAGACTTCCACCGCGTAAC2823767TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2877804-2877823
CCCTCATGACCTGACAGGCTTCCATGTAAC2877804TGCTGCTTGCTTCAGATCATGCCCAATATTTGTGCAACGGTGCAAGTTTC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2863724-2863743
TCATGACCTGACAGACTTCCACCGCGTAAC2863724TGCTGCTTGCTTCAGATCATGTCCAATATTCGTGCAACGGTGCAAGTTTC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2917761-2917780
CCCTCATGACCTGACAGGCTTCCATGTAAC2917761TGCTGCTTGCTTCAGATCATGCCCAATATTTGTGCAACGGTGCAAGTTTC
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2801597-2801616
CATGACCTGACTGACAGGCTTCCATGTAAC2801597TGCTGCTTGCTTCAGATCATGCCCAATATTTGTGCAACGGTGCAAGTTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGATCTGAAGCAAGCAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGATCTGAAGCAAGCAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.172 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=ATGATCTGAAGCAAGCAGCA&k=0&no_gap=0&offset=0&limit=50
0.332 | 0.159 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTGCTTGCTTCAGATCAT&k=0&no_gap=0&offset=0&limit=45
0.346 | 0.015 | cgi_end;

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