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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 19:09:59, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vulpes vulpes genome assembly, chromosome: 2.
OZ067163.1:65397748-65397767
GTCCCACCATCTGATTGGTAAACTATACCA65397748ATGATGTGCTACCATGGGGTAGCTAATAGAACTCTTGATTAAGAAGTACA
Vulpes vulpes genome assembly, chromosome: 2.
OZ067314.1:65269634-65269653
GTCCCACCATCTGATTGGTAAACTATACCA65269634ATGATGTGCTACCATGGGGTAGCTAATAGAACTCTTGATTAAGAAGTACA
Brassica oleracea var. viridis mRNA, clone: KALE-006F07, 3' end sequence.
DK517609.1:224-243
ACTGGTCAAGTTTCATACGATATTCACAGT224ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica oleracea var. viridis mRNA, clone: KALE-027O15, 3' end sequence.
DK525836.1:254-273
TCCCCTTTGGGAACTCTACACTGGTCAAGT254ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica oleracea var. viridis mRNA, clone: KALE-084I04, 3' end sequence.
DK547448.1:141-160
GCCCCTTTGGGAATTCTACACTTGTCAAGT141ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
BNSCS3CT_UP_250_G10_17MAY2007_068 Brassica napus BNSCS3CT Brassica napus cDNA 5', mRNA sequence.
EV056741.1:227-246
TCCCCTTTGGGAACTCTACACTGGTCAAGT227ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGGG
0183992 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV212414.1:351-370
GCCCCTTTGGGAATTCTACACTTGTCAAGT351ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
BR023533 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-055H07 5', mRNA sequence.
EX038889.1:484-503
TCCCCATTGGGAACTCTACACTGGTCAAGT484ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATAC
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:21122963-21122982
AATCTTTCAGTTTCATACGATATTCACAGT21122963ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:40878254-40878273
AATCTTTCAGTTTCATACGATATTCACAGT40878254ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica napus cultivar Xiang5A chromosome 7.
CP151902.1:15324030-15324049
TAATGTTGAGTTTCATGCTATATTCACAGT15324030ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:20937867-20937886
TAATGTTGAGTTTCATGCTATATTCACAGT20937867ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica napus genome assembly, chromosome: A07.
HG994361.1:8472583-8472602
TAATGTTGAGTTTCATGCTATATTCACAGT8472583ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica rapa genome, scaffold: A07.
LR031574.1:7543481-7543500
TAATGTTGAGTTTCATGCTATATTCACAGT7543481ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:17924363-17924382
TAATGTTGAGTTTCATGCTATATTCACAGT17924363ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:7845193-7845212
TAATGTTGAGTTTCATGCTATATTCACAGT7845193ATGATGTGCTACCATGGGGTCTTGAAGGAGTGTTGGCATACATAAAGGAG
Neverita josephinia genome assembly, chromosome: 7.
OZ203381.1:38229795-38229814
ACGGAGCACTGGAAGCAAACACATGGCATG38229795ATGATGTGCTACCATGGGGTCCTTTAGGGTGTGCGTATGTGTCTGTGCAT
EX2PLCL3_UP_015_E02_17APR2003_004 Brassica napus EX2PLCL3 Brassica napus cDNA 5', mRNA sequence.
EE503331.1:300-319
CTCCTTTATGTATGCCAACACTCCTTCAAG300ACCCCATGGTAGCACATCATACTTGACCAGTGTAGAGTTCCCAATGGGGA
0104261 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV203108.1:520-539
CTCCTTTATGTATGCCAACACTCCTTCAAG520ACCCCATGGTAGCACATCATACTTGACCAGTGTAGAGTTCCCAATGGGGA
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_979.
FX701529.1:605-624
CTCCTTTATGTATGCCAACACTCCTTCAAG605ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_3798.
FX730216.1:606-625
CTCCTTTATGTATGCCAACACTCCTTCAAG606ACCCCATGGTAGCACATCATACTTGACCAGTGTAGAGTTCCCAATGGGGA
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:21105825-21105844
CTCCTTTATGTATGCCAACACTCCTTCAAG21105825ACCCCATGGTAGCACATCATACTGTGAATATAGCATGAAACTCAACATTA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:40869195-40869214
CTCCTTTATGTATGCCAACACTCCTTCAAG40869195ACCCCATGGTAGCACATCATACTGTGAATATAGCATGAAACTCAACATTA
Brassica napus cultivar Xiang5A chromosome 7.
CP151902.1:15306892-15306911
CTCCTTTATGTATGCCAACACTCCTTCAAG15306892ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:20928808-20928827
CTCCTTTATGTATGCCAACACTCCTTCAAG20928808ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
Brassica napus genome assembly, chromosome: A07.
HG994361.1:8455439-8455458
CTCCTTTATGTATGCCAACACTCCTTCAAG8455439ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
Brassica napus genome assembly, chromosome: C07.
HG994371.1:15185679-15185698
CTCCTTTATGTATGCCAACACTCCTTCAAG15185679ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
Brassica rapa genome, scaffold: A07.
LR031574.1:7526306-7526325
CTCCTTTATGTATGCCAACACTCCTTCAAG7526306ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:17907503-17907522
CTCCTTTATGTATGCCAACACTCCTTCAAG17907503ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:7828012-7828031
CTCCTTTATGTATGCCAACACTCCTTCAAG7828012ACCCCATGGTAGCACATCATACTGTGAATATCGTATGAAACTGAAAGATT
Tethysbaena scabra genome assembly, chromosome: 15.
OZ195324.1:46329639-46329658
CTCATATTAATTTAAATACCCAATAAGGAA46329639ACCCCATGGTAGCACATCATGACAAAGCACACCTAATCAAGACAAATCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGATGTGCTACCATGGGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGATGTGCTACCATGGGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.626 | 0.617 | search_plus_done; http://172.18.8.135:50800/match?q=ATGATGTGCTACCATGGGGT&k=0&no_gap=0&offset=0&limit=50
0.920 | 0.294 | search_minus_done; http://172.18.8.135:50800/match?q=ACCCCATGGTAGCACATCAT&k=0&no_gap=0&offset=0&limit=33
0.929 | 0.009 | cgi_end;

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