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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:43:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

VBL1_5_G02_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachis hypogaea cDNA, mRNA sequence.
GO267946.1:483-502
CCAAACGGTCACGTACCACGTGGACATGCG483ATGATTCGGAGGTGAAGGTGGTGGCAGACATTAGTATCGAATTTTGTGAA
TSA: Arachis duranensis DurSNP_c29136.Ardu mRNA sequence.
HP029111.1:28-47
AACGGTCACGTGCCACGTGGACATGCG28ATGATTCGGAGGTGAAGGTGGTAGCAGACATTATTATCGAATTATGTGAA
TSA: Arachis hypogaea Ahy.Unigene26465 mRNA sequence.
JR566254.1:961-980
CCAAACGGTCACGTGCCACGTGGACATGCG961ATGATTCGGAGGTGAAGGTGGTGGCAGACATTATTATCGAATTTTGTGAA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:9243176-9243195
CCAAACGGTCACGTGCCACGTGGACATGCG9243176ATGATTCGGAGGTGAAGGTGGTGGCAGACATTATTATCGAATTTTGTGAA
VBL6_38_C19_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
GO332163.1:73-92
TTCACAAAATTCGATACTAATGTCTGCCAC73CACCTTCACCTCCGAATCATCGCATGTCCACGCGGCACGTGACCGTTTGG
DSL_009651 Developing seed cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpga0_0143_D02.ab1, mRNA sequence.
JK156571.1:109-128
TTCACAAAATTCGATAATAATGTCTGCCAC109CACCTTCACCTCCGAATCATCGCATGTCCACGTGGCACGTGACCGTTTGG
DSL_011899 Developing seed cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpga0_0169_E04.ab1, mRNA sequence.
JK158819.1:78-97
TTCACAAAATTCGATACTAATGTCTGCCAC78CACCTTCACCTCCGAATCATCGCATGTCCACGTGGCACGTGACCGTTTGG
TSA: Arachis hypogaea CL1Contig15020.Arhy mRNA sequence.
EZ736004.1:91-110
TTCACAAAATTCGATACTAATGTCTGCCAC91CACCTTCACCTCCGAATCATCGCATGTCCACGCGGCACGTGACCGTTTGG
Arachis hypogaea DNA, clone: AHGS41B23.
DH961683.1:417-436
TTCACAAAATTCGATAATAATGTCTGCCAC417CACCTTCACCTCCGAATCATCGCATGTCCACGTGGCACGTGACCGTTTGG
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:1573611-1573630
TTCACAAAATTCGATACTAATGTCTGCCAC1573611CACCTTCACCTCCGAATCATCGCATGTCCACGTGGCACGTGACCGTTTGG
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:1527956-1527975
TTCACAAAATTCGATACTAATGTCTGCCAC1527956CACCTTCACCTCCGAATCATCGCATGTCCACGTGGCACGTGACCGTTTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ATGATTCGGAGGTGAAGGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGATTCGGAGGTGAAGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.509 | 0.501 | search_plus_done; http://172.18.8.135:50400/match?q=ATGATTCGGAGGTGAAGGTG&k=0&no_gap=0&offset=0&limit=50
1.194 | 0.685 | search_minus_done; http://172.18.8.135:50400/match?q=CACCTTCACCTCCGAATCAT&k=0&no_gap=0&offset=0&limit=46
1.199 | 0.005 | cgi_end;

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